SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene53606

Length: 690 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene53606

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24108	8/13
SustainPine v2.0	sp_v2.0_unigene27824	4/13

Source	Descriptions	Term	Type	Identity
AutoFact	Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=C0PPR8_PICSI	-	-	93%
FL-Next	sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	serine threonine protein phosphatase pp1	-	-	86%

Source	InterPros	Term	Type	Identity
Sma3	Ribosomal protein S16	IPR000307	-	-
Sma3	Metallophosphoesterase domain	IPR004843	-	-
Sma3	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	IPR006186	-	-

Full-Lengther Next Prediction

SNPs (tot: 62)

Position	A %	C %	G %	T %	Probability
101		14		85	0.993539
102			14	85	0.993539
108	14	85			0.993534
110	85	14			0.993539
111	85			14	0.993539
112	85			14	0.993541
113	85		14		0.993541
119		16	83		0.994512
124	16			83	0.994512
135		12		87	0.992556
145	87	12			0.992555
147		85		14	0.993533
148	85		14		0.993533
149			85	14	0.993533
155	14		85		0.993533
156		14	85		0.993533
323		25	75		0.996479
326		25		75	0.996483
327	75		25		0.996483
332	75	25			0.996478
333	75	25			0.996478
334		66		33	0.997452
341	66			33	0.997452
342		33	66		0.997452
345	66			33	0.997452
377		20	80		0.995496
380	80	20			0.995496
381	80		20		0.995496
385		20	80		0.995498
387			80	20	0.995499
388	75			25	0.996473
391	75	25			0.996473
396	83		16		0.994517
397	66	16		16	0.98887
398	60	20		20	0.99255
399		20	80		0.995493
400	83			16	0.994517
403		16	83		0.994516
404	83	16			0.994516
410	80			20	0.995493
417		20	80		0.995493
418	20		80		0.995493
450	71		28		1.0
452		28	71		1.0
456	14	71			0.984337
457	85	14			0.993535
458	71	28			1.0
459		14		85	0.993535
460	66			33	1.0
461			20	80	0.995493
462	66		33		1.0
463		16	16	66	0.98887
464		20		80	0.995493
465			20	80	0.995493
466			20	80	0.995493
467		20		80	0.995493
468	80	20			0.995493
469	20	20		60	0.99255
470	60	20		20	0.99255
471		20		80	0.995493
472	80	20			0.995493
473	20			80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain