SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene52774

Length: 608 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene52774

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene60838	11/11

Source	Descriptions	Term	Type	Identity
AutoFact	Glutamate decarboxylase n=2 Tax=Pinaceae RepID=A0EJ89_PINPS	-	-	97%
FL-Next	tr=Glutamate decarboxylase; Pinus pinaster (Maritime pine).	-	-	100%
Blast2go	glutamate decarboxylase	-	-	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	nucleus	GO:0005634	Cellular Component	0.0	87%
Blast2go	cytosol	GO:0005829	Cellular Component	0.0	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glutamate decarboxylase	IPR010107	-	0.0	-
Sma3	Pyridoxal phosphate-dependent decarboxylase	IPR002129	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 53)

Position	A %	C %	G %	T %	Probability
11			33	66	0.997452
13		25	75		0.996479
18	25			75	0.996479
23		66		33	0.997452
24	66		33		0.997452
25	66		33		0.997452
26		33		66	0.997452
27	50			50	1.0
30	25	25	25	25	0.997389
33	25			75	0.996473
36		75		25	0.996473
37		25	75		0.996473
38	25		75		0.996473
59		50		50	1.0
71		14		85	0.993534
72	85		14		0.993534
74		66		33	1.0
76			85	14	0.993535
80	85	14			0.993535
82	83			16	0.994512
83			83	16	0.994512
84			16	83	0.994512
85	83		16		0.994512
91		16	83		0.994512
93		16	83		0.994512
97		14	85		0.993541
98	14		85		0.993541
245		14		85	0.993534
246	85		14		0.993534
250	85			14	0.993534
255	85	14			0.993534
257		83		16	0.994512
258	83		16		0.994512
263	83			16	0.994512
266	87			12	0.992555
267		12	75		0.975346
268		87	12		0.992555
270		87	12		0.992555
273		12		87	0.992555
274		12	87		0.992555
279	85	14			0.993533
283			85	14	0.993533
284	83	16			0.994512
288		75		25	1.0
290	14	71	14		0.984337
291	87			12	0.992555
299	85		14		0.993533
300	85	14			0.993533
302		85	14		0.993533
304		14		85	0.993533
305	14		85		0.993533
308		14		85	0.993533
309	14	85			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain