SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene52401

Length: 360 nt

UniGene Fasta

>uagpf_v2_unigene52401
CGTCGTGACCTTGGCTGTCACTCATCCTTTTGAGTTTATGCTTTTCCTCTGCCTCACAATATACACAACGACCAAACTTCCTAGTGTGGCGGATCTGCGTGTTCCCAACAAGGCCAATCTTTACAAATTGCAGAATGAGATCAGGGCATGGCCGATGTATCTGCCAAATATGGCAGAACTTCAGGCAGAATTAAGTATGTCTTTGCCTAACTGGGTTGGAAATTGTATTCCAGGAAACTTCTCACAATCCAATCAAGTAGAGAATTGCATACTTGTAAGTTATTACTTTCTTACTCTTATATTTTCAGTAGAAAATTGGAAATTGTATTTGGCACTGTGGCTTTTCAAGTTGATTCAATT

Ace file of the UniGene uagpf_v2_unigene52401

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene79621	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	protein	-	-	8.82818e-44	54%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to hormone stimulus	GO:0009725	Biological Process	8.82818e-44	54%
Blast2go	response to sucrose stimulus	GO:0009744	Biological Process	8.82818e-44	54%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	0.0	-
Sma3	Hly-III-related	IPR004254	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NP50

Fln msg: Distance to subject end: 188 aas, your sequence is shorter than subject: 119 - 355

Fln protein: VVTLAVTHPFEFMLFLCLTIYTTTKLPSVADLRVPNKANLYKLQNEIRAWPMYLPNMAELQAELSMSLPNWVGNCIPGNFSQSNQVENCILVSYYFLTLIFSVENWKLYLALWLFKLIQ

Protein Length: 120

Fln nts: CGTCGTGACCTTGGCTGTCACTCATCCTTTTGAGTTTATGCTTTTCCTCTGCCTCACAATATACACAACGACCAAACTTCCTAGTGTGGCGGATCTGCGTGTTCCCAACAAGGCCAATCTTTACAAATTGCAGAATGAGATCAGGGCATGGCCGATGTATCTGCCAAATATGGCAGAACTTCAGGCAGAATTAAGTATGTCTTTGCCTAACTGGGTTGGAAATTGTATTCCAGGAAACTTCTCACAATCCAATCAAGTAGAGAATTGCATACTTGTAAGTTATTACTTTCTTACTCTTATATTTTCAGTAGAAAATTGGAAATTGTATTTGGCACTGTGGCTTTTCAAGTTGATTCAATT

Fln Alignment:

uagpf_mira_rep_c71044___THPFEFMLFLCLTIYTTTKLPSVADLRVPNKANLYKLQNEIRAWPMYLPNMAELQAELSMSLPNWVGNCIPGNFSQSNQVENCIL
A9NP50________________THLAGFVLFLCLTIYTATKLPNVADLPVPNKANLYRLQNEIRAWPMYLPNMAELQAELRTSLPNWVGNCIPGNFSYSNQTEHCIL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain