SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene52017

Length: 773 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene52017

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16895	15/15

Source	Descriptions	Term	Type	Identity
AutoFact	Arf gtpase-activating protein, putative n=1 Tax=Ricinus communis RepID=B9SP31_RICCO	-	-	51%
FL-Next	sp=Probable ADP-ribosylation factor GTPase-activating protein AGD6; Arabidopsis thaliana (Mouse-ear cress).	-	-	57%
Blast2go	adp-ribosylation factor gtpase-activating protein agd6	-	-	65%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytosol	GO:0005829	Cellular Component	0.0	65%
Blast2go	nucleus	GO:0005634	Cellular Component	0.0	65%

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	Arf GTPase activating protein	IPR001164	-	-
Sma3	Tetrahaem cytochrome domain	IPR012286	-	-
Sma3	C2 membrane targeting protein	IPR018029	-	-

Full-Lengther Next Prediction

SNPs (tot: 51)

Position	A %	C %	G %	T %	Probability
129		85	14		0.993533
130	37		62		1.0
133			50	50	1.0
134		50		50	1.0
137		50		50	1.0
140		50		50	1.0
143			50	50	1.0
149	50		50		1.0
150		50	50		1.0
151	50			50	1.0
327		11	88		0.924009
330		11	88		0.924009
331	88		11		0.92391
334	11			88	0.924009
335		11		88	0.924009
340	88		11		0.924009
341	88	11			0.924009
342			88	11	0.924009
344	88			11	0.924009
345		11		88	0.924009
351	16		83		0.999991
355		16		83	0.999991
361		18		81	0.999994
362	81			18	0.999994
366	18			81	0.999994
398		10		90	0.90298
436	90	10			0.903134
437		90		10	0.903101
438	60			10	1.0
439	88		11		0.923564
441		11		88	0.923564
442	88			11	0.923564
443		88	11		0.923564
445	88	11			0.923564
448		11	88		0.923564
488	88	11			0.924009
489	88		11		0.924009
490	88			11	0.924009
491		11	88		0.923695
494	88		11		0.924009
496	88	11			0.923667
497		11		88	0.923604
498			88	11	0.92373
499	77			11	0.968132
500	87		12		0.992554
501	87		12		0.992554
503	85			14	0.993533
507	12			87	0.992554
510		12	87		0.992554
511	12			87	0.992554
561			83	16	0.994513

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain