SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene50779

Length: 244 nt

UniGene Fasta

>uagpf_v2_unigene50779
CGTCGTGACCTTGGCTGTCACTCAACTAAATGGGAAGAACCAGATGGAGGAAAAGGATCTTGGATAGTATATAAACTGCCAGATGGTTCAATGCAAAAGCTGGCTGCGTATCAATTGACATCAGCCAATGATGCCCCAGAGCGTGATCCAAAAGACTGGGTGTTAGAAGGAAGCAGTGATGGGGGTCAAACTTGGTACGTTCTTGATAGTCAAAAGTCCCAGTTCTTTGAGATGCGGTTTATGC

Ace file of the UniGene uagpf_v2_unigene50779

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11215	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Arabidopsis thaliana] sp\|Q9FGY9.1\|PNG1_ARATH RecName: Full=Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase; AltName: Full=Peptide:N-glycanase; Short=AtPNG1 dbj\|BAB10770.1\| unnamed pr	-	-	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	peptide-n -(n-acetyl-beta-glucosaminyl)asparagine amidase	-	-	67%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.	EC:3.5.1.52	-	0.0	67%

Source	GOs	Term	Type	Identity
Blast2go	cell adhesion	GO:0007155	Biological Process	67%
Blast2go	response to salicylic acid stimulus	GO:0009751	Biological Process	67%
Blast2go	response to ozone	GO:0010193	Biological Process	67%
Blast2go	response to microbial phytotoxin	GO:0010188	Biological Process	67%
Blast2go	peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	GO:0000224	Molecular Function	67%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	67%
Blast2go	cytosol	GO:0005829	Cellular Component	67%

Source	InterPros	Term	Type	e value	Identity
Sma3	Coagulation factor 5/8 C-terminal type domain	IPR000421	-	0.0	-
Sma3	Transglutaminase-like	IPR002931	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLV8

Fln msg: Distance to subject end: 49 aas, your sequence is shorter than subject: 81 - 657

Fln protein: RRDLGCHSTKWEEPDGGKGSWIVYKLPDGSMQKLAAYQLTSANDAPERDPKDWVLEGSSDGGQTWYVLDSQKSQFFEMRFM

Protein Length: 82

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACTAAATGGGAAGAACCAGATGGAGGAAAAGGATCTTGGATAGTATATAAACTGCCAGATGGTTCAATGCAAAAGCTGGCTGCGTATCAATTGACATCAGCCAATGATGCCCCAGAGCGTGATCCAAAAGACTGGGTGTTAGAAGGAAGCAGTGATGGGGGTCAAACTTGGTACGTTCTTGATAGTCAAAAGTCCCAGTTCTTTGAGATGCGGTTTATGC

Fln Alignment:

uagpf_mira_rep_c59770___GCHSTKWEEPDGGKGSWIVYKLPDGSMQKLAAYQLTSANDAPERDPKDWVLEGSSDGGQTWYVLDSQKSQFFEMRFM
B8LLV8________________GLKSTKWEEPDGAKGSWIIYKLPDGSMQKLAAYQLTSANDAPERDPKDWVLEGSSDGGQTWYILDSQKSQFFEMRFM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain