SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene49875

Length: 407 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene49875

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11642	9/10

Source	Descriptions	Term	Type	Identity
AutoFact	Glycerol kinase n=1 Tax=Pandanus amaryllifolius RepID=Q6RJ33_9LILI	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	glycerol kinase	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:2.7.1.3-	-	0.0	84%

Source	GOs	Term	Type	Identity
Blast2go	response to molecule of bacterial origin	GO:0002237	Biological Process	84%
Blast2go	glycerol catabolic process	GO:0019563	Biological Process	84%
Blast2go	glycerol-3-phosphate metabolic process	GO:0006072	Biological Process	84%
Blast2go	phosphorylation	GO:0016310	Biological Process	84%
Blast2go	response to microbial phytotoxin	GO:0010188	Biological Process	84%
Blast2go	carbohydrate kinase activity	GO:0019200	Molecular Function	84%
Blast2go	binding	GO:0005488	Molecular Function	84%
Blast2go	glycerol kinase activity	GO:0004370	Molecular Function	84%
Blast2go	response to karrikin	GO:0080167	Biological Process	84%

Source	InterPros	Term	Type	Identity
Sma3	Carbohydrate kinase, FGGY	IPR000577	-	-
Sma3	Carbohydrate kinase, FGGY, C-terminal	IPR018485	-	-
Sma3	Carbohydrate kinase, FGGY, N-terminal	IPR018484	-	-
Sma3	Glycerol kinase	IPR005999	-	-

Full-Lengther Next Prediction

SNPs (tot: 51)

Position	A %	C %	G %	T %	Probability
28		66	33		0.997471
31		66	33		0.997471
32			66	33	0.997476
34			66	33	0.997476
36		66		33	0.997476
37		66		33	0.997476
69		75	25		0.996481
71		25	75		0.996478
77		25	75		0.996478
78	75	25			0.996478
79			66	33	0.997452
80	66			33	0.997452
81			33	66	0.997452
83	75	25			0.99649
86		75		25	0.99649
89		25	75		0.996473
90	66			33	0.997452
91		33	66		0.997452
92	33		66		0.997452
141	14		85		0.993533
142		12	62	25	1.0
143		25	62	12	1.0
144		75	25		1.0
148	25			75	1.0
149		25	75		1.0
154	71		28		1.0
155		28	71		1.0
156	71			28	1.0
159	71	28			1.0
160	28			71	1.0
161		25	75		1.0
163		25	75		1.0
164	25	75			1.0
170	42		57		1.0
215		10		90	0.903101
217	90			10	0.903101
218		10	90		0.903101
219	90		10		0.903101
220	90			10	0.903101
223		10	90		0.903101
224		10		90	0.903101
225			90	10	0.903101
226	88			11	0.923564
229	88	11			0.923564
230			88	11	0.923564
231	88		11		0.923564
232	88			11	0.923564
233		11		88	0.923564
235	88	11			0.923564
236			88	11	0.923564
381	20		80		0.995493

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain