SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene49589

Length: 537 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene49589

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene22890	30/31

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ENT domain containing protein	-	-	5.0e-07	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%
Blast2go	unknown [Picea sitchensis]	-	-	0.0	59%

Source	InterPros	Term	Type	Identity
Sma3	EMSY N-terminal	IPR005491	-	-
Sma3	Agenet	IPR008395	-	-
Sma3	Tudor-like, plant	IPR014002	-	-

Full-Lengther Next Prediction

SNPs (tot: 53)

Position	A %	C %	G %	T %	Probability
62	33	33		33	0.997713
71		66		33	0.997458
78	33			66	1.0
87		37		62	1.0
89		14		85	0.993533
90		37		12	1.0
93		14	85		0.993533
96		85		14	0.993533
97		12		50	1.0
98	62			37	1.0
99	62		37		1.0
100	62		37		1.0
101	62	37			1.0
104	57			42	1.0
105		42	57		1.0
111	28		71		1.0
130		80		20	0.999996
132		61	38		1.0
137	15			84	0.999986
138	58	16	25		1.0
139	84	15			0.999986
140		25		75	1.0
141	61	23		15	1.0
142	58		16	25	1.0
143			75	25	1.0
144		15	84		0.999986
145			84	15	0.999986
146		25	75		1.0
147	61			38	1.0
148	61	15	23		1.0
149	75			25	1.0
150		38	61		1.0
151	84			15	0.999986
154	16	25			1.0
172	77	11		11	0.999842
174		5		83	0.999887
175		11		88	0.999937
176		16	83		1.0
178		11		83	0.999887
179			88	11	0.999937
180		22	77		1.0
181	11	88			0.999937
184	88		11		0.999937
185			11	88	0.999937
189	83		11		0.999887
199	92		7		0.999602
200	92			7	0.999602
202	7		88	3	0.998862
204	92	7			0.999602
207	92		7		0.999602
208			7	92	0.999602
209	92	7			0.999602
211		92	7		0.999602

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain