SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene47271

Length: 240 nt

UniGene Fasta

>uagpf_v2_unigene47271
CGTCGTGACCTTGGCTGTCACTCATTACTTTTATCATACACATCCTTCTCAAATTCCTCCTCCCACACAACAGTTTGAAATTTATGGAGATGGGAATGTGAAAGCTTACTTTGTGACTGGAGCTGACATTGGGAAATACACCATCAAGACCGTGGACGATGTGAGGACTCTGAACAAATGTGTCCACTTCCGGCCTTCCAAGAATTTCTTGACTATAAACGAGCTTGCAGGTATATGGGA

Ace file of the UniGene uagpf_v2_unigene47271

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene74051	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Isoflavone reductase-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZIN1_PICSI	-	-	2.0e-32	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	isoflavone reductase-like protein	-	-	8.92627e-43	83%

Source	InterPros	Term	Type	e value	Identity
Sma3	NmrA-like	IPR008030	-	0.0	-
Sma3	NAD(P)-binding domain	IPR016040	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NMU8

Fln msg: Distance to subject end: 77 aas, your sequence is shorter than subject: 79 - 352

Fln protein: VVTLAVTHYFYHTHPSQIPPPTQQFEIYGDGNVKAYFVTGADIGKYTIKTVDDVRTLNKCVHFRPSKNFLTINELAGIW

Protein Length: 80

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTACTTTTATCATACACATCCTTCTCAAATTCCTCCTCCCACACAACAGTTTGAAATTTATGGAGATGGGAATGTGAAAGCTTACTTTGTGACTGGAGCTGACATTGGGAAATACACCATCAAGACCGTGGACGATGTGAGGACTCTGAACAAATGTGTCCACTTCCGGCCTTCCAAGAATTTCTTGACTATAAACGAGCTTGCAGGTATATGGGA

Fln Alignment:

uagpf_mira_rep_c48489___YFYHTHPSQIPPPTQQFEIYGDGNVKAYFVTGADIGKYTIKTVDDVRTLNKCVHFRPSKNFLTINELAGIW
A9NMU8________________YFYHTHPSELPPPTEQFEIYGDGNVKAYFVTGSDIGKYTIKTVDDIRTVNKTVHFRPPKNFLTLNELAAIW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain