SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene47162

Length: 184 nt

UniGene Fasta

>uagpf_v2_unigene47162
CGTCGTGACCTTGGCTGTCACTCACTACAGTTATTTGAGGGAAACAGAGTTGAAAGATCTCTGCAAGACTTGTGGGCTTGTCGACTATTCATGCATAAGGCGACAGGCATTCATAATGATATCTGCCCGAAAGCCAGAGTAACTCCCAGTATTGTGGCAGATCTGCACTAATGCCCTTACCTAG

Ace file of the UniGene uagpf_v2_unigene47162

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7758	1/2

Source	Descriptions	Term	Type	Identity
AutoFact	S-adenosylmethionine-dependent methyltransferase n=4 Tax=Andropogoneae RepID=B6SRT6_MAIZE	-	-	69%
FL-Next	sp=Uncharacterized methyltransferase At2g41040, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	51%
Blast2go	uncharacterized methyltransferase chloroplastic-like	-	-	80%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	0.0	80%

Source	KEGGs	Term	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	80%
Blast2go	Tetracycline biosynthesis	00253	80%
Blast2go	Histidine metabolism	00340	80%
Blast2go	Tyrosine metabolism	00350	80%
Blast2go	Phenylalanine metabolism	00360	80%
Blast2go	Tryptophan metabolism	00380	80%
Blast2go	Benzoxazinoid biosynthesis	00402	80%
Blast2go	Selenocompound metabolism	00450	80%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	80%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	80%
Blast2go	Methane metabolism	00680	80%
Blast2go	Porphyrin and chlorophyll metabolism	00860	80%
Blast2go	Carotenoid biosynthesis	00906	80%
Blast2go	Phenylpropanoid biosynthesis	00940	80%
Blast2go	Flavonoid biosynthesis	00941	80%
Blast2go	Anthocyanin biosynthesis	00942	80%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	80%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	80%
Blast2go	Insect hormone biosynthesis	00981	80%
Blast2go	Biosynthesis of type II polyketide products	01057	80%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	80%
Blast2go	Metabolic pathways	01100	80%
Blast2go	Biosynthesis of secondary metabolites	01110	80%

Source	GOs	Term	Type	Identity
Blast2go	methylation	GO:0032259	Biological Process	80%
Blast2go	methyltransferase activity	GO:0008168	Molecular Function	80%
Blast2go	plastoglobule	GO:0010287	Cellular Component	80%
Blast2go	response to karrikin	GO:0080167	Biological Process	80%

Source	InterPros	Term	Type	Identity
Sma3	Uncharacterised protein family UPF0434/Trm112	IPR005651	-	-
Sma3	Protein of unknown function DUF597	IPR006734	-	-
Sma3	Methyltransferase type 11	IPR013216	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: Q0WPT7

Fln msg: your sequence is shorter than subject: 47 - 352

Fln protein: VVTLAVTHYSYLRETELKDLCKTCGLVDYSCIRRQAFIMISARKPE*

Protein Length: 48

Fln nts: CGTCGTGACCTTGGCTGTCACTCACTACAGTTATTTGAGGGAAACAGAGTTGAAAGATCTCTGCAAGACTTGTGGGCTTGTCGACTATTCATGCATAAGGCGACAGGCATTCATAATGATATCTGCCCGAAAGCCAGAGTAA___CTCCCAGTATTGTGGCAGATCTGCACTAATGCCCTTACCTAG

Fln Alignment:

uagpf_mira_rep_c48339___YSYLRETELKDLCKTCGLVDYSCIRRQAFIMISARKP
Q0WPT7________________YNYLMQDEIKDVCTSCGLTDYEDYIQDSFIMFTARKP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain