SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene45869

Length: 428 nt

UniGene Fasta

>uagpf_v2_unigene45869
CGTCGTGACCTTGGCTGTCACTCATGTGGGTATATGACAGTGCCACCTCCTGCTCATCCAACTTATGACCTCAAGACCATTATTAATCTAGCATTAGCTGAAGATGCAGGTGACAAAGGGGATGTGTCTTGTTTGGCAACCATTCCAGTTGAAAGAGAAGCAGAAGCTCATTTTTTGGCAAAAGAAGATGGCGTGATTGCTGGAATTGCAATGGCAATCATGGTATTTGAGGAGGTAGATCCTCAGTTGAAGGTTGATTGGAGTCAGAATGATGGGGATCTTGTTCATAGAGGTTTACAGTTTGGCTCGGTGTATGGCAGTGCCAGAAGCATTCTTGTGGCAGAAAGAGTTGCTCTCAACTTTATGCAACGAATGAGTGGAATTGCAACTCTTACAAAGGCAATGGCAGATGCTGCAAGGCCTGCACG

Ace file of the UniGene uagpf_v2_unigene45869

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9287	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	putative quinolinate phosphirobosyltransferase [Nicotiana tabacum]	-	-	72%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	74%
Blast2go	nicotinate-nucleotide pyrophosphorylase	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Nicotinate-nucleotide diphosphorylase (carboxylating).	EC:2.4.2.19	-	0.0	84%

Source	KEGGs	Term	Identity
Blast2go	Nicotinate and nicotinamide metabolism	00760	84%
Blast2go	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	84%
Blast2go	Metabolic pathways	01100	84%

Source	GOs	Term	Type	Identity
Blast2go	NAD biosynthetic process	GO:0009435	Biological Process	84%
Blast2go	nicotinate-nucleotide diphosphorylase (carboxylating) activity	GO:0004514	Molecular Function	84%
Blast2go	chloroplast	GO:0009507	Cellular Component	84%

Source	InterPros	Term	Type	Identity
Sma3	Aldolase-type TIM barrel	IPR013785	-	-
Sma3	Nicotinate-nucleotide pyrophosphorylase	IPR004393	-	-
Sma3	Quinolinate phosphoribosyl transferase, C-terminal	IPR002638	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: B9HJA3

Fln msg: Distance to subject end: 182 aas, atg_distance in limit (1-15): atg_distance = 5, your sequence is shorter than subject: 131 - 329

Fln protein: MTVPPPAHPTYDLKTIINLALAEDAGDKGDVSCLATIPVEREAEAHFLAKEDGVIAGIAMAIMVFEEVDPQLKVDWSQNDGDLVHRGLQFGSVYGSARSILVAERVALNFMQRMSGIATLTKAMADAARPA

Protein Length: 132

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGTGGGTAT_-_ATGACAGTGCCACCTCCTGCTCATCCAACTTATGACCTCAAGACCATTATTAATCTAGCATTAGCTGAAGATGCAGGTGACAAAGGGGATGTGTCTTGTTTGGCAACCATTCCAGTTGAAAGAGAAGCAGAAGCTCATTTTTTGGCAAAAGAAGATGGCGTGATTGCTGGAATTGCAATGGCAATCATGGTATTTGAGGAGGTAGATCCTCAGTTGAAGGTTGATTGGAGTCAGAATGATGGGGATCTTGTTCATAGAGGTTTACAGTTTGGCTCGGTGTATGGCAGTGCCAGAAGCATTCTTGTGGCAGAAAGAGTTGCTCTCAACTTTATGCAACGAATGAGTGGAATTGCAACTCTTACAAAGGCAATGGCAGATGCTGCAAGGCCTGCACG

Fln Alignment:

uagpf_mira_rep_c46493___MTVPPPAHPTYDLKTIINLALAEDAGDKGDVSCLATIPVEREAEAHFLAKEDGVIAGIAMAIMVFEEVDPQLKVDWSQNDGDLVHRGLQFGSVYGSARSILVAERVALNFMQRMSGIATLTKAMADAARPA
B9HJA3________________MVVKPPSHPTYDMKGVIKLALAEDAGDRGDVTCLATIPFDMEVEAHFLAKEDGIVAGISLAEMIFHEVDPSLKVEWSQKDGDYVQKGLQFGKVSGQAHNIVVAERVVLNFMQRMSGIATLTKTMADAARPA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain