SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene45798

Length: 386 nt

UniGene Fasta

>uagpf_v2_unigene45798
CGTCGTGACCTTGGCTGTCACTCATATGTCTATGATGTCTGATACTTATGATGCTACTAGACCTAGTACTTCTTCCACTGCTGCAGTGGGATGCCTGATTATTTTGAGCAGTGGAGATGAAGTGTATGGACCTGCTGCTGTTTTGGGCAATTATCAACAGCAGAACTTTCATGTTGTGTATGATATGGAGAATCAAAGAGTTGGGTTTCAGCAAAAACAATGTGCTCCAGTGGCCAATTGATTCTGTTTCATCCATGCACACTGGTTGGTTGCCAAAGTTGGTTGAAAGGGAACTCCATGGCATTCATGGTCTTACTACTATCTGTGATATTCATACTGGTGGTTGACAAAATAATCTGCATCCATACTTTCTTCCATAAACTTGC

Ace file of the UniGene uagpf_v2_unigene45798

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene61590	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	46%
Blast2go	aspartic proteinase nepenthesin-2	-	-	5.54883e-13	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	5.54883e-13	74%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase A1	IPR001461	-	-
Sma3	Peptidase aspartic, active site	IPR001969	-	-
Sma3	Peptidase aspartic, catalytic	IPR009007	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AC09

Fln msg: your sequence is shorter than subject: 80 - 370

Fln protein: VVTLAVTHMSMMSDTYDATRPSTSSTAAVGCLIILSSGDEVYGPAAVLGNYQQQNFHVVYDMENQRVGFQQKQCAPVAN*

Protein Length: 81

Fln nts: CGTCGTGACCTTGGCTGTCACTCATATGTCTATGATGTCTGATACTTATGATGCTACTAGACCTAGTACTTCTTCCACTGCTGCAGTGGGATGCCTGATTATTTTGAGCAGTGGAGATGAAGTGTATGGACCTGCTGCTGTTTTGGGCAATTATCAACAGCAGAACTTTCATGTTGTGTATGATATGGAGAATCAAAGAGTTGGGTTTCAGCAAAAACAATGTGCTCCAGTGGCCAATTGA___TTCTGTTTCATCCATGCACACTGGTTGGTTGCCAAAGTTGGTTGAAAGGGAACTCCATGGCATTCATGGTCTTACTACTATCTGTGATATTCATACTGGTGGTTGACAAAATAATCTGCATCCATACTTTCTTCCATAAACTTGC

Fln Alignment:

uagpf_mira_rep_c46387___CLIILSSGDEVY---GPAAVLGNYQQQNFHVVYDMENQRVGFQQKQC
D5AC09________________CLTMISSRGLLEVDSGPAVILGNDQQQDFYLLYDREKNRLGFTQQTC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain