SustainPineDB

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Assembly info
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ECs
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene44228

Length: 419 nt

UniGene Fasta

>uagpf_v2_unigene44228
CGTCGTGACCTTGGCTGTCACTCAATCTTCCATCGCTTGTTTACCAGCTTCTGCTTTTTGCCTCCAAGGGTTTTCAGAAGAAGGTCGTCGTGGAAGGGATTGTTAAATTATTTGAAGTTCTGTCTAGAGTTTCAGATGAAAACGGGGTTGGACAGAGGTCTGGCACTAAGAACTGTGCAGAGATAATGCGGCAAGTGGAAGGTACGGTTTTGCTGCACATGAATTTTGCAATAAAACAGGATCCTTCTCTGGGTCAGGAACTGGTGAGTGTGATTCGTAACTATCATGGATCGATGACATCGTTCACGGTGGCTTTGTTGCTGTCGATTGCGCGAATTCAGAGGTTTGAGGAGGGTTCCATGGGTCTTTTGAGAACACTGGTGATGAGGTCTCATCAAGATTACAAACAAGCAAGAGAC

Ace file of the UniGene uagpf_v2_unigene44228

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene44661	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Fanconi anemia group I protein isoform 1 [Homo sapiens] sp\|Q9NVI1.4\|FANCI_HUMAN RecName: Full=Fanconi anemia group I protein; Short=Protein FACI gb\|ABQ63084.1\| Fanconi anemia complementation group I [Homo sapiens] gb\|AAI40770.1\| FANCI protein [Homo sapien	-	-	1.0e-16	38%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	49%
Blast2go	fanconi anemia group i protein	-	-	2.92861e-34	65%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	2.92861e-34	65%
Blast2go	nucleoplasm	GO:0005654	Cellular Component	2.92861e-34	65%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphopantetheine attachment site	IPR006162	-	0.0	-
Sma3	Molybdopterin oxidoreductase, prokaryotic, conserved site	IPR006655	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: tr_plants

Fln subject: F6H6X9

Fln msg: Distance to subject end: 1071 aas, atg_distance in limit (1-15): atg_distance = 1, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 137 - 1197

Fln protein: PWLSLNLPSLVYQLLLFASKGFQKKVVVEGIVKLFEVLSRVSDENGVGQRSGTKNCAEIMRQVEGTVLLHMNFAIKQDPSLGQELVSVIRNYHGSMTSFTVALLLSIARIQRFEEGSMGLLRTLVMRSHQDYKQARD

Protein Length: 138

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCTTCCATCGCTTGTTTACCAGCTTCTGCTTTTTGCCTCCAAGGGTTTTCAGAAGAAGGTCGTCGTGGAAGGGATTGTTAAATTATTTGAAGTTCTGTCTAGAGTTTCAGATGAAAACGGGGTTGGACAGAGGTCTGGCACTAAGAACTGTGCAGAGATAATGCGGCAAGTGGAAGGTACGGTTTTGCTGCACATGAATTTTGCAATAAAACAGGATCCTTCTCTGGGTCAGGAACTGGTGAGTGTGATTCGTAACTATCATGGATCGATGACATCGTTCACGGTGGCTTTGTTGCTGTCGATTGCGCGAATTCAGAGGTTTGAGGAGGGTTCCATGGGTCTTTTGAGAACACTGGTGATGAGGTCTCATCAAGATTACAAACAAGCAAGAGAC

Fln Alignment:

uagpf_mira_rep_c44027___VYQLLLFASKGFQKKVVVEGIVKLFEVLSRVSDENGVGQRSGTKNCAEIMRQVEGTVLLHMNFAIKQDPSLGQELVSVIRNYHGSMTSFTVALLLSIARIQRFEEGSMGLLRTLVMRSHQDYKQARD
F6H6X9________________VYQLLVLASKGFSKREVIEGIVMFF------------GSKMGSK-ATSIVRQVEGTVLLHVNFAVKQDPSLGQEVLGLVRSDLRVFNNFTVAILFSLARVRRFSESSMGILKAALIMAYRDFKSAED

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain