SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene43513

Length: 195 nt

UniGene Fasta

>uagpf_v2_unigene43513
CGTCGTGACCTTGGCTGTCACTCAGCTGTTGATTCACCTATGGAGATTAACATATCACATCAGATGCGCCAAGAAATTTTGGACACAACTGATCTTGCTCATCCTGATCTCTTCACAAATGCAGTCAATGAGATGGTGCGAATGATGCAAATGAATCTGGAGAAGGACTACCAGAATTCCACTTTCTATTCACGA

Ace file of the UniGene uagpf_v2_unigene43513

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1125	1/2

Source	Descriptions	Term	Type	Identity
AutoFact	regulator of G-protein signaling 1 [Arabidopsis thaliana] gb\|AAN12971.1\| unknown protein [Arabidopsis thaliana] gb\|AEE77116.1\| regulator of G-protein signaling 1 [Arabidopsis thaliana]	-	-	52%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	63%
Blast2go	regulator of g-protein signaling 1	-	-	71%

Source	GOs	Term	Type	Identity
Blast2go	response to glucose stimulus	GO:0009749	Biological Process	71%
Blast2go	response to water deprivation	GO:0009414	Biological Process	71%
Blast2go	G-protein coupled receptor signaling pathway	GO:0007186	Biological Process	71%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	71%
Blast2go	positive regulation of GTPase activity	GO:0043547	Biological Process	71%
Blast2go	regulation of cell proliferation	GO:0042127	Biological Process	71%
Blast2go	sugar mediated signaling pathway	GO:0010182	Biological Process	71%
Blast2go	G-protein coupled receptor activity	GO:0004930	Molecular Function	71%
Blast2go	GTPase activator activity	GO:0005096	Molecular Function	71%
Blast2go	nucleus	GO:0005634	Cellular Component	71%
Blast2go	plasma membrane	GO:0005886	Cellular Component	71%

Source	InterPros	Term	Type	e value	Identity
Sma3	Regulator of G protein signalling	IPR000342	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7TAJ5

Fln msg: Distance to subject end: 56 aas, your sequence is shorter than subject: 65 - 466

Fln protein: RRDLGCHSAVDSPMEINISHQMRQEILDTTDLAHPDLFTNAVNEMVRMMQMNLEKDYQNSTFYSR

Protein Length: 66

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGCTGTTGATTCACCTATGGAGATTAACATATCACATCAGATGCGCCAAGAAATTTTGGACACAACTGATCTTGCTCATCCTGATCTCTTCACAAATGCAGTCAATGAGATGGTGCGAATGATGCAAATGAATCTGGAGAAGGACTACCAGAATTCCACTTTCTATTCACGA

Fln Alignment:

uagpf_mira_rep_c42927___MEINISHQMRQEILDTTDLAHPDLFTNAVNEMVRMMQMNLEKDYQNSTFYSR
D7TAJ5________________MEVNISHRNRQEILTTPDLAHPDLFNNALNELLQLMKMNLAKDYWSSMFFKK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain