SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene43174

Length: 101 nt

UniGene Fasta

>uagpf_v2_unigene43174
CGTCGTGACCTTGGCTGTCACTCATTGGGTGTTGACTGGTGATAAGATGGAGACTGCAATCAATATAGGATTTGCATGCAGTCTTCTTCGGCAAGGCATGA

Ace file of the UniGene uagpf_v2_unigene43174

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6027	1/2

Source	Descriptions	Term	Type	Identity
AutoFact	Aminophospholipid ATPase n=3 Tax=Populus trichocarpa RepID=B9MWV5_POPTR	-	-	76%
FL-Next	sp=Putative phospholipid-transporting ATPase 5; Arabidopsis thaliana (Mouse-ear cress).	-	-	100%
Blast2go	aminophospholipid atpase	-	-	85%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phospholipid-translocating ATPase.	EC:3.6.3.1	-	0.0	85%

Source	GOs	Term	Type	Identity
Blast2go	ATP biosynthetic process	GO:0006754	Biological Process	85%
Blast2go	phospholipid transport	GO:0015914	Biological Process	85%
Blast2go	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	GO:0015662	Molecular Function	85%
Blast2go	ATP binding	GO:0005524	Molecular Function	85%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	85%
Blast2go	phospholipid-translocating ATPase activity	GO:0004012	Molecular Function	85%
Blast2go	mitochondrion	GO:0005739	Cellular Component	85%
Blast2go	integral to membrane	GO:0016021	Cellular Component	85%

Source	InterPros	Term	Type	Identity
Sma3	SET domain	IPR001214	-	-
Sma3	ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter	IPR001757	-	-
Sma3	PIK-related kinase, FAT	IPR003151	-	-
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	Haloacid dehalogenase-like hydrolase	IPR005834	-	-
Sma3	ATPase, P-type cation exchange, alpha subunit	IPR006069	-	-
Sma3	ATPase, P-type, phospholipid-translocating, flippase	IPR006539	-	-
Sma3	ATPase, P-type, ATPase-associated domain	IPR008250	-	-
Sma3	HAD superfamily hydrolase-like, type 3	IPR013200	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Somatotropin hormone, conserved site	IPR018116	-	-
Sma3	ATPase, P-type phosphorylation site	IPR018303	-	-
Sma3	Formate C-acetyltransferase glycine radical, conserved site	IPR019777	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9SGG3

Fln msg: Distance to subject end: 456 aas, your sequence is shorter than subject: 33 - 1228

Fln protein: VVTLAVTHWVLTGDKMETAINIGFACSLLRQGM

Protein Length: 34

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTGGGTGTTGACTGGTGATAAGATGGAGACTGCAATCAATATAGGATTTGCATGCAGTCTTCTTCGGCAAGGCATGA

Fln Alignment:

uagpf_mira_rep_c42406___WVLTGDKMETAINIGFACSLLRQGM
Q9SGG3________________WVLTGDKMETAINIGFACSLLRQGM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain