SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene41199

Length: 219 nt

UniGene Fasta

>uagpf_v2_unigene41199
CGTCGTGACCTTGGCTGTCACTCATTATTGCTCTTTGGCCCAGCTTCTGGAAAGTGGATTTTATCATGCTGATCCACATCCTGGCAATCTCCTACGTACTTATGATGGAAAATTAGCTTACATAGATTTTGGAATGATGGGTGAATTCAAACAAGATTTGAGAGATGGACTGATTGAGGCTTGTTGCATCTGGTAAATCGAGAGTTTGATGCATTGGCT

Ace file of the UniGene uagpf_v2_unigene41199

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1685	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	aarF domain-containing kinase [Arabidopsis thaliana] sp\|Q94BU1.1\|Y1181_ARATH RecName: Full=Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic; Flags: Precursor gb\|AAK64000.1\| At1g71810/F14O23_17 [Arabidopsis thaliana] gb\|AAM162	-	-	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	uncharacterized aarf domain-containing protein kinase chloroplastic-like	-	-	88%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	88%
Blast2go	protein kinase activity	GO:0004672	Molecular Function	88%
Blast2go	ATP binding	GO:0005524	Molecular Function	88%
Blast2go	plastoglobule	GO:0010287	Cellular Component	88%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	ABC-1	IPR004147	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLY2

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 316 aas, your sequence is shorter than subject: 65 - 442

Fln protein: VVTLAVTHYCSLAQLLESGFYHADPHPGNLLRTYDGKLAYIDFGMMGEFKQDLRDGLIEACCIW*

Protein Length: 66

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTATTGCTCTTTGGCCCAGCTTCTGGAAAGTGGATTTTATCATGCTGATCCACATCCTGGCAATCTCCTACGTACTTATGATGGAAAATTAGCTTACATAGATTTTGGAATGATGGGTGAATTCAAACAAGATTTGAGAGATGGACTGATTGAGGCTTGTTGCATCTGGTAAATCGAGAGTTTGATGCATTGGCT

Fln Alignment:

uagpf_mira_c39373___YCSLAQLLESGFYHADPHPGNLLRTYDGKLAYIDFGMMGEFKQDLRDGLIEAC
B8LLY2________________YCSLTQLLESGFYHADPHPGNLLRTYDGKLAYIDFGMMGEFKQDFRDGLIEAC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain