SustainPineDB

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Assembly info
Unigenes
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SSRs
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GOs
ECs
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene40059

Length: 228 nt

UniGene Fasta

>uagpf_v2_unigene40059
CGTCGTGACCTTGGCTGTCACTCATTCTCAAAACCCATGACCAACTCCTTGCTGGCCGGACTGTCGTGCAATCACTTAAGGCCATTTCCCACGAGAAGTCCTCAATAGTTTATGCTCAGTGTGGATCTCACTGGCGTATGCTCAGGCGTATATCGAATATGGAGCTCTTCTCTGTCAAGAGGCTAGAAGCTCTGCAACACCTGAGAAGAGATCAAGTGAATCGAACGA

Ace file of the UniGene uagpf_v2_unigene40059

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8433	2/3

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cytochrome P450 [Verbena x hybrida]	-	-	2.00386e-43	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%
Blast2go	cytochrome p450	-	-	0.0	62%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	62%
Blast2go	heme binding	GO:0020037	Molecular Function	62%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	62%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	62%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LKD2

Fln msg: Distance to subject end: 352 aas, atg_distance in limit (1-15): atg_distance = 15, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 73 - 441

Fln protein: PWLSLILKTHDQLLAGRTVVQSLKAISHEKSSIVYAQCGSHWRMLRRISNMELFSVKRLEALQHLRRDQVNRT

Protein Length: 74

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTCTCAAAACCCATGACCAACTCCTTGCTGGCCGGACTGTCGTGCAATCACTTAAGGCCATTTCCCACGAGAAGTCCTCAATAGTTTATGCTCAGTGTGGATCTCACTGGCGTATGCTCAGGCGTATATCGAATATGGAGCTCTTCTCTGTCAAGAGGCTAGAAGCTCTGCAACACCTGAGAAGAGATCAAGTGAATCGAACGA

Fln Alignment:

uagpf_mira_rep_c37145___ILKTHDQLLAGRTVVQSLKAISHEKSSIVYAQCGSHWRMLRRISNMELFSVKRLEALQHLRRDQVNR
B8LKD2________________VLKTHDHILSGRNLIQAAKALSHYKTSIVFGQYGSHWRMLRRVSVNELFSVERLEALQHHRRDQVNR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain