SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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GOs
ECs
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InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene39278

Length: 232 nt

UniGene Fasta

>uagpf_v2_unigene39278
CGTCGTGACCTTGGCTGTCACTCAATCTTAGCCAGGAAGTTAGAGGATTCATATTTTCCAAGCTCTTGGAACGCAAACCTGAGTTTACTGCAGATCTGATGGAATTTCGAGATTATTTGCTGTCATCTACAGTATCAGATACCCTGGATGTATGGGAACTGAAAGATCTAGGACATCAAACAGCTCAGAGGATTGTTCAGGCTTCAGATCCATTGCACTCTATGCAAGAAAT

Ace file of the UniGene uagpf_v2_unigene39278

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene65594	3/3

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucose:glycoprotein glucosyltransferase [Arabidopsis thaliana] dbj\|BAF02127.1\| putative UDP-glucose:glycoprotein glucosyltransferase [Arabidopsis thaliana] gb\|AEE35174.1\| UDP-glucose:glycoprotein glucosyltransferase [Arabidopsis thaliana]	-	-	9.0e-26	82%
FL-Next	sp=UDP-glucose:glycoprotein glucosyltransferase; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	82%
Blast2go	udp-glucose:glycoprotein glucosyltransferase	-	-	3.94154e-33	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type hypersensitive response	GO:0009626	Biological Process	3.94154e-33	89%
Blast2go	response to salicylic acid stimulus	GO:0009751	Biological Process	3.94154e-33	89%
Blast2go	defense response signaling pathway, resistance gene-independent	GO:0010204	Biological Process	3.94154e-33	89%
Blast2go	anthocyanin metabolic process	GO:0046283	Biological Process	3.94154e-33	89%
Blast2go	transferase activity, transferring glycosyl groups	GO:0016757	Molecular Function	3.94154e-33	89%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	3.94154e-33	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucose:Glycoprotein Glucosyltransferase	IPR009448	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q0WL80

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 1257 aas, your sequence is shorter than subject: 76 - 1613

Fln protein: S*PWLSLNLSQEVRGFIFSKLLERKPEFTADLMEFRDYLLSSTVSDTLDVWELKDLGHQTAQRIVQASDPLHSMQE

Protein Length: 77

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCTTAGCCAGGAAGTTAGAGGATTCATATTTTCCAAGCTCTTGGAACGCAAACCTGAGTTTACTGCAGATCTGATGGAATTTCGAGATTATTTGCTGTCATCTACAGTATCAGATACCCTGGATGTATGGGAACTGAAAGATCTAGGACATCAAACAGCTCAGAGGATTGTTCAGGCTTCAGATCCATTGCACTCTATGCAAGAAAT

Fln Alignment:

uagpf_mira_rep_c35596___NLSQEVRGFIFSKLLERKPEFTADLMEFRDYLLSSTVSDTLDVWELKDLGHQTAQRIVQASDPLHSMQE
Q0WL80________________DLSQDVRGFIFSKILDRKPELRSEVMAFRDYLLSSTVSDTLDVWELKDLGHQTAQRIVHASDPLQSMQE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain