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UniGene Name: uagpf_v2_unigene35930
Length: 179 nt
 UniGene Fasta
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Ace file of the UniGene uagpf_v2_unigene35930
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene8799 | 2/2 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | WS02718.B21_L19 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02718_L19 5, mRNA sequence. | - | - | 0.0 | 88% |
| Blast2go | dual specificity protein phosphatase family protein | - | - | 0.0 | 74% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | 5-amino-6-(5-phosphoribosylamino)uracil reductase. | EC:1.1.1.193 | - | 0.0 | 74% |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Riboflavin metabolism | 00740 | 0.0 | 74% | |
| Blast2go | Metabolic pathways | 01100 | 0.0 | 74% | |
| Blast2go | Phosphorylase. | EC:2.4.1.1 | - | 0.0 | 74% |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Starch and sucrose metabolism | 00500 | 0.0 | 74% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | FAD metabolic process | GO:0046443 | Biological Process | 0.0 | 74% |
| Blast2go | protein dephosphorylation | GO:0006470 | Biological Process | 0.0 | 74% |
| Blast2go | response to water deprivation | GO:0009414 | Biological Process | 0.0 | 74% |
| Blast2go | regulation of gene expression | GO:0010468 | Biological Process | 0.0 | 74% |
| Blast2go | response to temperature stimulus | GO:0009266 | Biological Process | 0.0 | 74% |
| Blast2go | regulation of stomatal movement | GO:0010119 | Biological Process | 0.0 | 74% |
| Blast2go | chloroplast organization | GO:0009658 | Biological Process | 0.0 | 74% |
| Blast2go | cortical microtubule organization | GO:0043622 | Biological Process | 0.0 | 74% |
| Blast2go | response to abscisic acid stimulus | GO:0009737 | Biological Process | 0.0 | 74% |
| Blast2go | synapsis | GO:0007129 | Biological Process | 0.0 | 74% |
| Blast2go | response to high light intensity | GO:0009644 | Biological Process | 0.0 | 74% |
| Blast2go | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | 74% |
| Blast2go | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | GO:0008703 | Molecular Function | 0.0 | 74% |
| Blast2go | protein tyrosine/serine/threonine phosphatase activity | GO:0008138 | Molecular Function | 0.0 | 74% |
| Blast2go | protein binding | GO:0005515 | Molecular Function | 0.0 | 74% |
| Blast2go | phosphorylase activity | GO:0004645 | Molecular Function | 0.0 | 74% |
| Blast2go | chloroplast stroma | GO:0009570 | Cellular Component | 0.0 | 74% |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Dual specificity phosphatase, catalytic domain | IPR000340 | - | 0.0 | - |
| Sma3 | Protein-tyrosine/Dual-specificity phosphatase | IPR000387 | - | 0.0 | - |
| Sma3 | Actin-fragmin kinase, catalytic domain | IPR015275 | - | 0.0 | - |
| Sma3 | Zinc finger, C2H2-like | IPR015880 | - | 0.0 | - |
| Sma3 | Protein-tyrosine phosphatase, active site | IPR016130 | - | 0.0 | - |
| Sma3 | WD40 repeat, conserved site | IPR019775 | - | 0.0 | - |
| Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg: Sequence length < 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
