SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene35552

Length: 199 nt

UniGene Fasta

>uagpf_v2_unigene35552
GCACTAACATACAAGAGATCAGATCCTGTATGTGAATTCATCAGATATAGCACGACTCTGAATGCGAAAAGCTGGGGTACTCTTCTCAACACTTTTTATGATCTAGAATCTGTTTATGTCGATCATCTGCACAGGGTTGTTTCCGGCAGGCCTGTTTGGTCTGTAGGTCCTCTGCTTCCCCCTGCTGTTTCGAGGTGAA

Ace file of the UniGene uagpf_v2_unigene35552

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene37086	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RLH6_RICCO	-	-	2.0e-10	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	udp-glycosyltransferase 89a2-like	-	-	2.02266e-27	61%

Source	GOs	Term	Type	e value	Identity
Blast2go	quercetin 4'-O-glucosyltransferase activity	GO:0080046	Molecular Function	2.02266e-27	61%
Blast2go	quercetin 7-O-glucosyltransferase activity	GO:0080044	Molecular Function	2.02266e-27	61%
Blast2go	quercetin 3-O-glucosyltransferase activity	GO:0080043	Molecular Function	2.02266e-27	61%

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NX38

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 226 aas, your sequence is shorter than subject: 66 - 468

Fln protein: ALTYKRSDPVCEFIRYSTTLNAKSWGTLLNTFYDLESVYVDHLHRVVSGRPVWSVGPLLPPAVSR*

Protein Length: 67

Fln nts: GCACTAACATACAAGAGATCAGATCCTGTATGTGAATTCATCAGATATAGCACGACTCTGAATGCGAAAAGCTGGGGTACTCTTCTCAACACTTTTTATGATCTAGAATCTGTTTATGTCGATCATCTGCACAGGGTTGTTTCCGGCAGGCCTGTTTGGTCTGTAGGTCCTCTGCTTCCCCCTGCTGTTTCGAGGTGAA

Fln Alignment:

uagpf_mira_c23170___YKRSDPVCEFIRYSTTLNAKSWGTLLNTFYDLESVYVDHLHRVVSGRPVWSVGPLLPPAV
A9NX38________________YKRSDPVSEFIRYSMNLNVKSWGNLINTFNDLEAVYMDHLHR-VSGRPVWSVGPLFPPAV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain