SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene35328

Length: 174 nt

UniGene Fasta

>uagpf_v2_unigene35328
TTATTACAATTTCTGGCAGCACTTGGAAACTGAATACCCTGGAGGGAACCTTCTTATGGTAACCGTTACAGACGATGAAGCCCGACGCATAGAACAACAGCCTGACTATGACACCAGAGAAGAAATAATGGGCGTTCTGAAGAAAATGTTTGGCAACGATATTCCAGAGATGGA

Ace file of the UniGene uagpf_v2_unigene35328

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene56559	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	polyamine oxidase [Zea mays]	-	-	1.0e-37	60%
FL-Next	sp=Polyamine oxidase; Zea mays (Maize).	-	-	0.0	59%
Blast2go	polyamine oxidase	-	-	0.0	78%

Source	InterPros	Term	Type	Identity
Sma3	Reverse transcriptase	IPR000477	-	-
Sma3	Tobamoviral movement protein	IPR001022	-	-
Sma3	Flavin amine oxidase	IPR001613	-	-
Sma3	Peptidase aspartic, active site	IPR001969	-	-
Sma3	Amine oxidase	IPR002937	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: O64411

Fln msg: Distance to subject end: 86 aas, your sequence is shorter than subject: 57 - 500

Fln protein: YYNFWQHLETEYPGGNLLMVTVTDDEARRIEQQPDYDTREEIMGVLKKMFGNDIPEM

Protein Length: 58

Fln nts: TTATTACAATTTCTGGCAGCACTTGGAAACTGAATACCCTGGAGGGAACCTTCTTATGGTAACCGTTACAGACGATGAAGCCCGACGCATAGAACAACAGCCTGACTATGACACCAGAGAAGAAATAATGGGCGTTCTGAAGAAAATGTTTGGCAACGATATTCCAGAGATGGA

Fln Alignment:

uagpf_mira_c22897___YYNFWQHLETEYPGGNLLMVTVTDDEARRIEQQPDYDTREEIMGVLKKMF-GNDIPE
O64411________________YYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain