SustainPineDB

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Assembly info
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SSRs
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GOs
ECs
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene34911

Length: 207 nt

UniGene Fasta

>uagpf_v2_unigene34911
CGTCGTGACCTTGGCTGTCACTCATCTCAAAGGTCTACGAGTAGAGAATTCAGGGAACATCAAGAAAGTGGAAAGCCATATGTTTTACTCGATGTACGAGACGAACACCAGTACAAAATTGCTGCTTTGCCAAATTCTGTAAACATTCCATTATCATGTTTGGAGACTCAACTCCAGCTAATCCAAGAAGCTATGAGAGAGGTCTCA

Ace file of the UniGene uagpf_v2_unigene34911

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6497	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Ubiquitin-activating enzyme E1, putative n=1 Tax=Ricinus communis RepID=B9STZ8_RICCO	-	-	62%
FL-Next	sp=Adenylyltransferase and sulfurtransferase MOCS3; Oryza sativa subsp. japonica (Rice).	-	-	42%
Blast2go	sulfurtransferase mocs3	-	-	76%

Source	GOs	Term	Type	Identity
Blast2go	cellular macromolecule metabolic process	GO:0044260	Biological Process	76%
Blast2go	cellular nitrogen compound metabolic process	GO:0034641	Biological Process	76%
Blast2go	primary metabolic process	GO:0044238	Biological Process	76%
Blast2go	Mo-molybdopterin cofactor sulfurase activity	GO:0008265	Molecular Function	76%
Blast2go	transferase activity	GO:0016740	Molecular Function	76%
Blast2go	nucleotide binding	GO:0000166	Molecular Function	76%
Blast2go	cytoplasm	GO:0005737	Cellular Component	76%

Source	InterPros	Term	Type	Identity
Sma3	UBA/THIF-type NAD/FAD binding fold	IPR000594	-	-
Sma3	Rhodanese-like	IPR001763	-	-
Sma3	MoeZ/MoeB	IPR007901	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: A3ACF3

Fln msg: Distance to subject end: 57 aas, your sequence is shorter than subject: 69 - 445

Fln protein: RRDLGCHSSQRSTSREFREHQESGKPYVLLDVRDEHQYKIAALPNSVNIPLSCLETQLQLIQEAMREVS

Protein Length: 70

Fln nts: CGTCGTGACCTTGGCTGTCACTCATCTCAAAGGTCTACGAGTAGAGAATTCAGGGAACATCAAGAAAGTGGAAAGCCATATGTTTTACTCGATGTACGAGACGAACACCAGTACAAAATTGCTGCTTTGCCAAATTCTGTAAACATTCCATTATCATGTTTGGAGACTCAACTCCAGCTAATCCAAGAAGCTATGAGAGAGGTCTCA

Fln Alignment:

uagpf_mira_c22384___RSTSREFREHQESGKPYVLLDVRDEHQYKIAALPNSVNIPLSCLETQLQLIQEAMREVS
A3ACF3________________RVSCRDYKKVLDSGRPHLLVDVRPSHHFQIASMAHSINVPLSLLEEKLPLLRDSAREVS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain