SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene34432

Length: 202 nt

UniGene Fasta

>uagpf_v2_unigene34432
GGGTTGTGCACATGTAAAGGATATTGCGAAAGCCCAAATACTACTATATGAAACGCCTTCAGCCTCTGGGAGGCACCTTTGTGTTGAGACTATAGCCCATTGGAGCGATTTTGCTGAGTTGACTGCAAAACTATATCCAGAATATAATGTGCACAAGTTTACAAGTGTCACACAACCAGGCTTGGTACGCGTTGGGAATCCA

Ace file of the UniGene uagpf_v2_unigene34432

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene20761	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9SKV5_RICCO	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	cinnamoyl- reductase	-	-	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NN98

Fln msg: Distance to subject end: 35 aas, your sequence is shorter than subject: 67 - 126

Fln protein: GCAHVKDIAKAQILLYETPSASGRHLCVETIAHWSDFAELTAKLYPEYNVHKFTSVTQPGLVRVGNP

Protein Length: 68

Fln nts: GGGTTGTGCACATGTAAAGGATATTGCGAAAGCCCAAATACTACTATATGAAACGCCTTCAGCCTCTGGGAGGCACCTTTGTGTTGAGACTATAGCCCATTGGAGCGATTTTGCTGAGTTGACTGCAAAACTATATCCAGAATATAATGTGCACAAGTTTACAAGTGTCACACAACCAGGCTTGGTACGCGTTGGGAATCCA

Fln Alignment:

uagpf_mira_c21813___GCAHVKDIAKAQILLYETPSASGRHLCVETIAHWSDFAELTAKLYPEYNVHKFTSVTQPGLVRVGN
A9NN98________________GCAHVKDIAKAQILLYETPSASGRHLCVESIAHWSDFAELTAKLYPEYNVHKFTGVTQPGLVRVKN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain