SustainPineDB

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Assembly info
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ECs
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene34175

Length: 164 nt

UniGene Fasta

>uagpf_v2_unigene34175
CAAGTCAGAGTCTTCGTCTCAGTAGTTGGAACACTAAACAACCAAGGTTATCAGATTCTGAATCAATATTCTCATGTATCAAAGCCATATTTAGGGTAAACTTAGGGCTCGTGTTAAAGGCACTCTTGAACAAACATAGAATACTATTTGGAATGTTATCTGGA

Ace file of the UniGene uagpf_v2_unigene34175

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9060	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	GPI mannosyltransferase 1 n=1 Tax=Arabidopsis thaliana RepID=F4K8F7_ARATH	-	-	7.0e-37	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%
Blast2go	gpi mannosyltransferase 1	-	-	0.0	68%

Source	GOs	Term	Type	Identity
Blast2go	GPI anchor biosynthetic process	GO:0006506	Biological Process	68%
Blast2go	cellulose biosynthetic process	GO:0030244	Biological Process	68%
Blast2go	cell division	GO:0051301	Biological Process	68%
Blast2go	plant-type cell wall biogenesis	GO:0009832	Biological Process	68%
Blast2go	embryo development	GO:0009790	Biological Process	68%
Blast2go	alpha-1,4-mannosyltransferase activity	GO:0051751	Molecular Function	68%
Blast2go	integral to membrane	GO:0016021	Cellular Component	68%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	68%
Blast2go	endoplasmic reticulum membrane	GO:0005789	Cellular Component	68%

Source	InterPros	Term	Type	e value	Identity
Sma3	Mannosyltransferase, DXD	IPR007704	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LMK7

Fln msg: Distance to subject end: 199 aas, your sequence is shorter than subject: 54 - 293

Fln protein: SQSLRLSSWNTKQPRLSDSESIFSCIKAIFRVNLGLVLKALLNKHRILFGMLSG

Protein Length: 55

Fln nts: CAAGTCAGAGTCTTCGTCTCAGTAGTTGGAACACTAAACAACCAAGGTTATCAGATTCTGAATCAATATTCTCATGTATCAAAGCCATATTTAGGGTAAACTTAGGGCTCGTGTTAAAGGCACTCTTGAACAAACATAGAATACTATTTGGAATGTTATCTGGA

Fln Alignment:

uagpf_mira_c21494___SQSLRLSSWNTKQPRLSDSESIFSCIKAIFRVNLGLVLKALLNKHRILFGMLSG
B8LMK7________________SQSLRLSYWNTKQPRLSDSESIFLCIKAIFRVNLGLVLKKLLNKHRILFGMLSG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain