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UniGene Name: uagpf_v2_unigene33862
Length: 235 nt
 UniGene Fasta
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| >uagpf_v2_unigene33862
C |
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Ace file of the UniGene uagpf_v2_unigene33862
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene8312 | 2/2 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA | - | - | 0.0 | 73% |
| FL-Next | sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 96% |
| Blast2go | phytochrome | - | - | 0.0 | 86% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | red, far-red light phototransduction | GO:0009585 | Biological Process | 0.0 | 86% |
| Blast2go | two-component signal transduction system (phosphorelay) | GO:0000160 | Biological Process | 0.0 | 86% |
| Blast2go | protein-tetrapyrrole linkage | GO:0017006 | Biological Process | 0.0 | 86% |
| Blast2go | peptidyl-histidine phosphorylation | GO:0018106 | Biological Process | 0.0 | 86% |
| Blast2go | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | 86% |
| Blast2go | protein-chromophore linkage | GO:0018298 | Biological Process | 0.0 | 86% |
| Blast2go | detection of visible light | GO:0009584 | Biological Process | 0.0 | 86% |
| Blast2go | ATP binding | GO:0005524 | Molecular Function | 0.0 | 86% |
| Blast2go | G-protein coupled photoreceptor activity | GO:0008020 | Molecular Function | 0.0 | 86% |
| Blast2go | protein homodimerization activity | GO:0042803 | Molecular Function | 0.0 | 86% |
| Blast2go | two-component sensor activity | GO:0000155 | Molecular Function | 0.0 | 86% |
| Blast2go | membrane | GO:0016020 | Cellular Component | 0.0 | 86% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: C0PS46
Fln msg: Distance to subject end: 263 aas, your sequence is shorter than subject: 77 - 1132
Fln protein:
G
Protein Length:
78
Fln nts:
C
Fln Alignment:
uagpf_mira_c21121___GWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRIT
C0PS46________________GWARDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDGHEIEKFPFAFFDKQGKYVEALLTANKRTDADGRIT
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
