SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene33295

Length: 207 nt

UniGene Fasta

>uagpf_v2_unigene33295
ACAATGCTGGAGACCTCCAAGGGGGGCTTTGATTTGCAGAAGATAGTGGATGGGATTGAGGGCTGTGGGTTTAACCAGGTGTATATCATTGGTGGAGATGGGACTATGAATGGTGCAGTGAAGATATTTGAAGAAGTCAAGAGGAGGAGGCTCAAGGTTTCCATTGTTGGGATCCCAAGTTCTGTGGATAATGATGTGGGGATCATT

Ace file of the UniGene uagpf_v2_unigene33295

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene38227	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	6-phosphofructokinase 2 [Arabidopsis thaliana] sp\|Q9FIK0.1\|K6PF2_ARATH RecName: Full=6-phosphofructokinase 2; AltName: Full=Phosphofructokinase 2; AltName: Full=Phosphohexokinase 2 dbj\|BAB11328.1\| pyrophosphate-fructose-6-phosphate 1-phosphotransferase-li	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	protein	-	-	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	74%
Blast2go	cytosol	GO:0005829	Cellular Component	0.0	74%

Source	InterPros	Term	Type	Identity
Sma3	Phosphofructokinase domain	IPR000023	-	-
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	RNA recognition motif domain	IPR000504	-	-
Sma3	Zinc finger, CCCH-type	IPR000571	-	-
Sma3	Ankyrin repeat	IPR002110	-	-
Sma3	Protease-associated domain, PA	IPR003137	-	-
Sma3	Proteinase inhibitor I9	IPR010259	-	-
Sma3	Pyrophosphate-dependent phosphofructokinase TP0108	IPR012004	-	-
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	-
Sma3	Peptidase S8, subtilisin-related	IPR015500	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PT73

Fln msg: Distance to subject end: 237 aas, your sequence is shorter than subject: 69 - 426

Fln protein: TMLETSKGGFDLQKIVDGIEGCGFNQVYIIGGDGTMNGAVKIFEEVKRRRLKVSIVGIPSSVDNDVGII

Protein Length: 70

Fln nts: ACAATGCTGGAGACCTCCAAGGGGGGCTTTGATTTGCAGAAGATAGTGGATGGGATTGAGGGCTGTGGGTTTAACCAGGTGTATATCATTGGTGGAGATGGGACTATGAATGGTGCAGTGAAGATATTTGAAGAAGTCAAGAGGAGGAGGCTCAAGGTTTCCATTGTTGGGATCCCAAGTTCTGTGGATAATGATGTGGGGATCATT

Fln Alignment:

uagpf_mira_c20446___TMLETSKGGFDLQKIVDGIEGCGFNQVYIIGGDGTMNGAVKIFEEVKRRRLKVSIVGIPSSVDNDVGII
C0PT73________________TVLETSRGGFDLQKIVDGIEANGFNQVYIIGGDGTMKGAVKVFEEVKRRRLKVSIVGIPNSVDNDVGVI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain