SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene32744

Length: 151 nt

UniGene Fasta

>uagpf_v2_unigene32744
GTTAGATTATACTATTATAGAAGCGAGAGCGGCGAAACACTGACCAAGAAAGACATTATCCCCTTTCTATATGACTTGTTCATAGCCGGTAGCGAAACAACCAGCTCAACCGTTGAATGGGCAATAGCTGAAGCCCTTCACAATCCTCAAA

Ace file of the UniGene uagpf_v2_unigene32744

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene26665	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cytochrome P450 76C2 [Arabidopsis thaliana] sp\|O64637.1\|C76C2_ARATH RecName: Full=Cytochrome P450 76C2 gb\|AAC06158.1\| putative cytochrome P450 [Arabidopsis thaliana] gb\|AAL32678.1\| putative cytochrome P450 [Arabidopsis thaliana] gb\|AAM47979.1\| putative cy	-	-	1.99993e-41	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Blast2go	cytochrome p450	-	-	0.0	71%

Source	InterPros	Term	Type	Identity
Sma3	Protease inhibitor I4, serpin	IPR000215	-	-
Sma3	Reverse transcriptase	IPR000477	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	F-box domain, cyclin-like	IPR001810	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	Protein of unknown function DUF247, plant	IPR004158	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A813

Fln msg: Distance to subject end: 186 aas, your sequence is shorter than subject: 50 - 321

Fln protein: VRLYYYRSESGETLTKKDIIPFLYDLFIAGSETTSSTVEWAIAEALHNPQ

Protein Length: 51

Fln nts: GTTAGATTATACTATTATAGAAGCGAGAGCGGCGAAACACTGACCAAGAAAGACATTATCCCCTTTCTATATGACTTGTTCATAGCCGGTAGCGAAACAACCAGCTCAACCGTTGAATGGGCAATAGCTGAAGCCCTTCACAATCCTCAAA

Fln Alignment:

uagpf_mira_c19801___YRSESGETLTKKDIIPFLYDLFIAGSETTSSTVEWAIAEALHNPQ
D5A813________________YRSESGERFTKKDIIPFLYDLLIAGTETNSSTIEWTIAEAIRNPR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain