SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene32705

Length: 84 nt

UniGene Fasta

>uagpf_v2_unigene32705
GGAGGACGTTCTAGAGGTTTACAAGTCTATGTTCATGAAATCTGCTCGCATGCTTGGAGATCAGTTGGCTTTAGCTTGGATTGT

Ace file of the UniGene uagpf_v2_unigene32705

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene5868	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	uncharacterized protein	-	-	80%

Source	GOs	Term	Type	Identity
Blast2go	tRNA splicing, via endonucleolytic cleavage and ligation	GO:0006388	Biological Process	80%
Blast2go	transferase activity, transferring phosphorus-containing groups	GO:0016772	Molecular Function	80%
Blast2go	mitochondrion	GO:0005739	Cellular Component	80%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphotransferase KptA/Tpt1	IPR002745	-	0.0	-
Sma3	Protein of unknown function DUF1442	IPR009902	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ABA0

Fln msg: Distance to subject end: 96 aas, your sequence is shorter than subject: 27 - 391

Fln protein: EDVLEVYKSMFMKSARMLGDQLALAWI

Protein Length: 28

Fln nts: GGAGGACGTTCTAGAGGTTTACAAGTCTATGTTCATGAAATCTGCTCGCATGCTTGGAGATCAGTTGGCTTTAGCTTGGATTGT

Fln Alignment:

uagpf_mira_c19754___EDVLEVYKSMFMKSARMLGDQLALAWI
D5ABA0________________EEVLEIYKSMFMKAARMLGDQLALAWI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain