SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene31653

Length: 769 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene31653

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1048	9/9

Source	Descriptions	Term	Type	Identity
AutoFact	Heat shock protein DnaJ [Medicago truncatula]	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	chaperone protein dnaj 6	-	-	76%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	76%

Source	GOs	Term	Type	Identity
Blast2go	protein folding	GO:0006457	Biological Process	76%
Blast2go	response to stress	GO:0006950	Biological Process	76%
Blast2go	protein phosphorylation	GO:0006468	Biological Process	76%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	76%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	76%
Blast2go	heat shock protein binding	GO:0031072	Molecular Function	76%
Blast2go	heme binding	GO:0020037	Molecular Function	76%
Blast2go	ATP binding	GO:0005524	Molecular Function	76%
Blast2go	unfolded protein binding	GO:0051082	Molecular Function	76%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	76%
Blast2go	nucleus	GO:0005634	Cellular Component	76%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3		IPR015609	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
172	75			25	0.996476
173		25	75		0.996478
175			75	25	0.996478
176		75	25		0.996476
179	75	25			0.996476
181			66	33	0.997452
182		66		33	0.997452
183		66	33		0.997452
185		33		66	0.997452
190		33	66		0.997452
287		33	66		1.0
289	66			33	1.0
290	66	33			1.0
291	66		33		1.0
293	66		33		1.0
295		33	66		1.0
296	66	33			1.0
297	66			33	1.0
298	66			33	1.0
305	60	40			1.0
306	40			60	1.0
308	60			40	1.0
445	60		40		1.0
447		40		60	1.0
453		40		60	1.0
454		40	60		1.0
455	50			50	1.0
456			60	40	1.0
459	60		40		1.0
462			40	60	1.0
468	60	40			1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain