SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene30662

Length: 798 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene30662

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2	30/31

Source	Descriptions	Term	Type	e value	Identity
AutoFact	actin filament bundling protein P-115-ABP [Lilium longiflorum]	-	-	0.0	62%
FL-Next	sp=Villin-4; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	71%

Source	InterPros	Term	Type	Identity
Sma3	Ammonium transporter	IPR001905	-	-
Sma3	Villin headpiece	IPR003128	-	-
Sma3	Gelsolin	IPR007122	-	-
Sma3	Gelsolin domain	IPR007123	-	-
Sma3	Phosphoesterase	IPR007312	-	-
Sma3		IPR010256	-	-
Sma3	Ammonium transporter, conserved site	IPR018047	-	-

Full-Lengther Next Prediction

SNPs (tot: 53)

Position	A %	C %	G %	T %	Probability
56	66	33			0.997457
60			33	66	0.997459
64		33	66		0.997457
65	66	33			0.997457
66	66			33	0.997457
107	66	33			0.997452
108	66		33		0.997452
109	66			33	0.997452
111	75		25		0.996481
112	75			25	0.996481
116	75	25			0.996481
118	66			33	0.997452
119	66		33		0.997452
121	66	33			0.997452
124	66			33	0.997452
126	33	66			0.997452
130		33	66		0.997452
154			20	80	0.995498
155			80	20	0.995498
157			20	80	0.995498
162	80	20			0.995498
163		20	80		0.995498
164			75	25	0.996473
167	75		25		0.996473
168	75	25			0.996473
169	75			25	0.996473
175			75	25	0.996473
226		20	80		0.995493
227	20	80			0.995493
334		14		85	0.993537
338	16	16			0.988813
339		16	83		0.994512
341	71	14	14		0.984352
342	28		71		1.0
343		14	85		0.993537
344		14	85		0.993537
346	83			16	0.994512
347			16	83	0.994512
349	83	16			0.994512
354		16	83		0.994512
356			83	16	0.994512
358	50	50			1.0
366		12	87		0.992556
368		87		12	0.992556
372			12	87	0.992554
376		87		12	0.99256
377		85	14		0.993533
378	85			14	0.993533
383	87			12	0.99256
384	87	12			0.99256
385	85			14	0.993533
481	92			7	0.999602
482	92	7			0.999602

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain