SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene29705

Length: 189 nt

UniGene Fasta

>uagpf_v2_unigene29705
CGTCGTGACCTTGGCTGTCACTCAAAGGTCGTTCCGGCAATAGAACGCGTTACTTTGGCTGTCATGATTCGTAGATGGGCAAGAGAAAGATTTCGATGCCATGATTCTAGCAACAGGTTACAGGAGCAATGTCCCCTTGTGGCTCAAGGAGCGACAGTTCTTTGCAGAAGATGGATTCCCCAGAAGGCC

Ace file of the UniGene uagpf_v2_unigene29705

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene68762	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Monooxygenase, putative n=1 Tax=Ricinus communis RepID=B9RPC4_RICCO	-	-	9.0e-32	61%
FL-Next	sp=Flavin-containing monooxygenase YUCCA1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	64%
Blast2go	flavine-containing monoxygenase	-	-	5.56903e-38	76%

Source	InterPros	Term	Type	Identity
Sma3	Pyridine nucleotide-disulphide oxidoreductase, class-II	IPR000103	-	-
Sma3	Flavin monooxygenase FMO	IPR000960	-	-
Sma3	Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	IPR001327	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3	Monooxygenase, FAD-binding	IPR002938	-	-
Sma3	2-oxo acid dehydrogenase, lipoyl-binding site	IPR003016	-	-
Sma3	Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal	IPR003953	-	-
Sma3	FAD-dependent pyridine nucleotide-disulphide oxidoreductase	IPR013027	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Beta-ketoacyl synthase, active site	IPR018201	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9SZY8

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 61 aas, your sequence is shorter than subject: 62 - 414

Fln protein: VVTLAVTQRSFRQ*NALLWLS*FVDGQEKDFDAMILATGYRSNVPLWLKERQFFAEDGFPRR

Protein Length: 63

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAAGGTCGTTCCGGCAATAGAACGCGTTACTTTGGCTGTCATGATTCGTAGATGGGCAAGAGAAAGATTTCGATGCCATGATTCTAGCAACAGGTTACAGGAGCAATGTCCCCTTGTGGCTCAAGGAGCGACAGTTCTTTGCAGAAGATGGATTCCCCAGAAGGCC

Fln Alignment:

uagpf_mira_c11147___FVDGQEKDFDAMILATGYRSNVPLWLKERQFFAEDGFPR
Q9SZY8________________FMDGQEKDFDSIIFATGYKSNVPTWLQGGDFFTDDGMPK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain