SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19975

Length: 901 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19975

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14995	17/25
SustainPine v2.0	sp_v2.0_unigene35618	4/25

Source	Descriptions	Term	Type	Identity
AutoFact	DUF599 domain containing protein	-	-	35%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	50%
Blast2go	uncharacterized protein	-	-	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF599	IPR006747	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 46)

Position	A %	C %	G %	T %	Probability
109			25	75	0.996473
117		25	75		0.996473
123	75			25	0.996473
127	25			75	0.996473
128		25		75	0.996473
131	25	75			0.996473
168		16		83	0.994512
169	16			83	0.994512
171		14	85		0.993533
173			85	14	0.993533
174	85	14			0.993533
175			14	85	0.993533
179		14	85		0.993533
180	85	14			0.993533
184	85		14		0.993533
185	85	14			0.993533
186		85		14	0.993533
187		85	14		0.993533
188	85			14	0.993533
190		42		57	1.0
193	14	85			0.993533
224	50		50		1.0
225		50		50	1.0
232		54		45	1.0
242		72	27		1.0
258			72	27	1.0
259		72		27	1.0
264			18	81	0.999994
285	82			17	1.0
307		76		23	1.0
318	76		23		1.0
324		23		76	1.0
336		76	23		1.0
372	25		75		1.0
384	40		60		1.0
479		22		77	0.999999
486	71			28	1.0
490		28	71		1.0
560			16	83	0.994512
566		83	16		0.994512
568	83	16			0.994512
569		16	83		0.994512
573			16	83	0.994512
574			16	83	0.994512
577		83		16	0.994512
580		16		83	0.994512

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain