SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19942

Length: 607 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19942

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24942	12/29
SustainPine v2.0	sp_v2.0_unigene60463	17/29

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF538 domain containing protein	-	-	4.0e-34	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	45%
Blast2go	protein	-	-	0.0	76%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuole	GO:0005773	Cellular Component	0.0	76%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF538	IPR007493	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
68	33	66			1.0
70			66	33	0.997452
72		66	33		0.997452
73	66			33	0.997452
74	33		66		1.0
78	66	33			0.997452
79			66	33	0.997452
82			33	66	0.997452
93	66	33			0.997452
94	33			66	0.997452
158			66	33	0.997452
160	66		33		0.997452
164	66	33			0.997452
165		33		66	0.997452
170	40	20		40	1.0
171	40	40		20	1.0
174	40	20	40		1.0
176		40	40		1.0
183	60	40			1.0
185			40	60	1.0
244	88			11	0.999937
251		11	88		0.999937
316	7		92		0.999602
322			92	7	0.999602
578	70	30			1.0
584	16	83			0.994512
586		16	83		0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain