SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19859

Length: 795 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19859

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14426	55/57

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Mesd domain containing protein	-	-	5.0e-07	27%
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice).	-	-	0.0	60%
Blast2go	uncharacterized protein	-	-	0.0	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	0.0	68%

Full-Lengther Next Prediction

SNPs (tot: 39)

Position	A %	C %	G %	T %	Probability
170		33		66	0.997452
171	66		33		0.997452
174		66	33		0.997452
180		33	66		0.997452
182		66		33	0.997452
183	66		33		0.997452
184	66		33		0.997452
186		66		33	0.997452
188			66	33	0.997452
189	66	33			0.997452
194	33			66	0.997452
233		66		33	0.997452
382		7		92	0.999664
384	7	84		7	0.99801
386	84		7		0.99801
387		92		7	0.999664
388		84	7	7	0.99801
389	92			7	0.999664
390		92	7		0.999664
391		7	7	84	0.99801
392		7		92	0.999664
395			92	7	0.999664
397	7			92	0.999664
398		92	7		0.999664
400		7	84		0.99801
401	7	7	84		0.99801
402	7			92	0.999664
403		7		92	0.999664
422	5	92	2		0.990091
423			5	95	0.997749
424			95	5	0.997749
426	92	2	5		0.990091
429			2	92	0.991359
430	5		2	92	0.991359
433	92		2	5	0.991359
435		2	5	92	0.992495
436	94		5		0.998397
437	91	8			1.0
440	2	5	91		0.99441

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain