SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19787

Length: 813 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19787

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15485	45/47
SustainPine v2.0	sp_v2.0_unigene60828	1/47

Source	Descriptions	Term	Type	Identity
AutoFact	ribosomal protein L3 [Solanum lycopersicum]	-	-	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	60s ribosomal protein l3-like	-	-	95%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein L3	IPR000597	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 49)

Position	A %	C %	G %	T %	Probability
48		66	33		0.997452
53	33			66	0.997452
56	33	66			0.997452
57		66	33		0.997452
59		33		66	0.997452
60			66	33	0.997452
61			66	33	0.997452
63	33			66	0.997452
64	33		66		0.997452
68	66			33	0.997452
69		66		33	0.997452
108	33		66		0.997452
118		33		66	0.997452
307		14		85	0.993533
313	85			14	0.993533
316	85	14			0.993533
317		14	85		0.993533
319		85		14	0.993533
323	85	14			0.993533
324	85			14	0.993533
328		85		14	0.993533
329		14	85		0.993533
330	14		85		0.993533
388	83	16			0.994512
389	83		16		0.994512
391		16	83		0.994512
396		16		83	0.994512
398			80	20	0.995493
402		20	80		0.995493
403		80		20	0.995493
406	20		80		0.995493
407		20	80		0.995493
467		87	12		0.992554
472		87		12	0.992554
475		12	87		0.992554
476			87	12	0.992554
477	87			12	0.992554
482		87		12	0.992554
483		12	87		0.992554
485	83	16			0.994512
486			83	16	0.994512
487		16	83		0.994512
488	20	80			0.995493
788		33	66		0.997452
789	66	33			0.997452
790	66			33	0.997452
791	66			33	0.997452
792		33		66	0.997452
794	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain