SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19402

Length: 1364 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19402

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14482	53/65
SustainPine v2.0	sp_v2.0_unigene64157	1/65
SustainPine v2.0	sp_v2.0_unigene77167	4/65

Source	Descriptions	Term	Type	Identity
AutoFact	Epoxide hydrolase n=2 Tax=Nicotiana RepID=Q9ZP87_TOBAC	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	epoxide hydrolase 2-like	-	-	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	0.0	73%
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-
Sma3	Epoxide hydrolase-like	IPR000639	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NVJ5

Fln msg:

Fln protein: MDKILHKQVNVGGLNLHVAEIGSGPAVLLLHGFPEIWYSWRHQMIALAEAGFHAIAPDFRGYGLSDQPSEPEKAGYYDLVEDMVGLLDALGIEKVWRAAKLDFGAAIAYYLGLCHPDRVKGIVTMGIPYLKPGGLDKWDSAPKGLYFRHWQEPGRGLADLGRFDAKAVVRNIYTLFSSSELPVAEDGKEVMDLYDPSKPLPPWFTEDDLQMYSSLYEKSGFVFPMQVPYLCSKRDPGRLTPFSDCTIQAPCLLIMGTKDYFLKFPGVEYYVNSEMLKSAVPNIEIKFFPEGSHFVQEQFPEEVNKLLLGFLNQHL*

Protein Length: 317

Fln nts: CGTCGTGACCTTGGCTGTCACTCGTGTTCTTGGCTGTTAGTGAGCTTTCCTGGACCGCATTTAGATTGATGCGAAAACAATATAACTTGTTCTCCAGCCAAGTTCAGGTTCTTCCCCACCTTATTCGTGATTAGTACCATCTAAAAGGCCTGCCGAATTATCAGCA_-_ATGGACAAAATACTGCACAAGCAAGTCAATGTTGGAGGGCTTAATTTACATGTTGCAGAGATTGGATCAGGTCCGGCTGTGCTGTTACTGCATGGATTTCCAGAGATATGGTATTCATGGCGCCATCAGATGATAGCGTTGGCAGAAGCAGGGTTTCATGCAATTGCTCCTGATTTTCGAGGTTATGGGCTGTCTGATCAGCCCTCTGAACCAGAGAAAGCTGGATATTATGACCTTGTTGAAGACATGGTGGGCCTGCTGGATGCCTTGGGCATTGAGAAAGTGTGGCGTGCGGCGAAACTTGATTTTGGAGCAGCGATTGCATATTATTTAGGTCTTTGTCATCCAGATCGAGTGAAAGGAATTGTGACGATGGGCATACCTTACTTGAAACCTGGAGGACTGGATAAGTGGGACTCAGCTCCTAAAGGGCTCTATTTTAGACATTGGCAGGAACCCGGGAGAGGCTTGGCAGATCTTGGGCGTTTTGATGCAAAAGCAGTGGTAAGGAATATATATACACTTTTCTCTAGTAGTGAATTGCCCGTGGCAGAAGATGGTAAGGAGGTAATGGATCTCTATGATCCTTCCAAACCATTGCCACCATGGTTCACTGAGGATGATCTTCAGATGTATTCAAGCCTTTATGAGAAATCTGGTTTTGTGTTCCCTATGCAAGTCCCATACCTTTGCAGTAAAAGGGATCCGGGGAGATTGACCCCTTTCAGTGACTGCACTATTCAAGCTCCTTGCCTTCTTATCATGGGTACCAAGGATTATTTTCTGAAATTTCCGGGAGTGGAGTATTATGTCAACAGTGAGATGCTAAAGTCTGCTGTGCCCAATATAGAGATCAAATTTTTTCCAGAAGGAAGCCATTTTGTCCAAGAACAGTTTCCAGAGGAAGTGAATAAACTTCTCCTTGGCTTCCTGAATCAGCACCTGTGA___GTGATATCAATCACAGGAGAGAATGCAAGGCACAGAGAATTGATATTAGAAAACTTTTCTAAGGTACTAGGTTTGAAATAAGCATATAGGTGCTCTCTGTAATTAGAGCATGGCCTTAATTATATGCATTTCTCTTTCATAATTTCATCTTATACTTTGAGTTTAGCCTTATGTGTCATGGAGATCTTGGTTCCTTCTAAGACTGCAGTGATTGGTCTCTTAGTTTTCTAAGACCTTGAACTACATATTT

Fln Alignment:

Contig19402___MDKILHKQVNVGGLNLHVAEIGSGPAVLLLHGFPEIWYSWRHQMIALAEAGFHAIAPDFRGYGLSDQPSEPEKAGYYDLVEDMVGLLDALGIEKVWRAAKLDFGAAIAYYLGLCHPDRVKGIVTMGIPYLKPGGLDKWDSAPKGLYFRHWQEPGRGLADLGRFDAKAVVRNIYTLFSSSELPVAEDGKEVMDLYDPSKPLPPWFTEDDLQMYSSLYEKSGFVFPMQVPYLCSKRDPGRLTPFSDCTIQAPCLLIMGTKDYFLKFPGVEYYVNSEMLKSAVPNIEIKFFPEGSHFVQEQFPEEVNKLLLGFLNQH
A9NVJ5________________MDKIQHKQVDVGGLNLHVAEIGSGPTVLLLHGFPEIWYSWRHQMIALAEAGFHAIAPDFRGYGLSDQPSEPEKAVYYDLVEDMAGLLDALGIEKVFVVGK-DFGAAVAYYFDLCHPDRVKGIVTLGIPYMKPGGKGNWDSAPKGLYFLHWQEPGRGLADLGRFDVKTVVRNIYTLFSSSELPVAEDGKEVMDLYNPSIPLPPWFSEDDLQMYSSLYEKSGFVFPIQVPYLCSKRDIGGLANFKDRTIQAPCLLILGTKDYFLKFPGVEYYVNSEMLKSCVPNLEIKFFPEGSHFVQEQFPEEVNKLLLGFLNQH

SNPs (tot: 112)

Position	A %	C %	G %	T %	Probability
100		75	25		0.996473
101	75			25	0.996473
106	75			25	0.996473
107	75			25	0.996473
116		25	75		0.996473
117			75	25	0.996473
118		25		75	0.996473
119	25			75	0.996473
155	80	20			0.995493
157			80	20	0.995493
159		80	20		0.995493
164			80	20	0.995493
165	80		20		0.995493
166	80		20		0.995493
167		20		80	0.995493
169	80		20		0.995493
173			80	20	0.995493
195	83	16			0.994512
198	83		16		0.994512
199	83			16	0.994512
201	16			83	0.994512
203	83	16			0.994512
204	83			16	0.994512
207		16		83	0.994512
210		16	83		0.994512
212		16	83		0.994512
213			83	16	0.994512
214		16	83		0.994512
215	16	83			0.994512
292	85		14		0.993533
294		14	85		0.993533
296		85		14	0.993533
298	14	85			0.993533
300	85	14			0.993533
302		85		14	0.993533
303	85		14		0.993533
305	85	14			0.993533
457	50	50			1.0
464	50			50	1.0
465		50	50		1.0
466		50	50		1.0
469		25	50		1.0
471		50		50	1.0
472		25	25	50	1.0
474			25	75	0.996473
475		50	50		1.0
478	25	50	25		0.995533
479			25	75	0.996473
481	25	25	50		0.995533
483		25		75	0.996473
484		25		75	0.996473
492	75			25	0.996473
494		75		25	0.996473
495		25	75		0.996473
497		25		75	0.996473
499		25	75		0.996473
500	25	75			0.996473
597	88			11	0.923564
599	11	88			0.923564
600		11		88	0.923564
602		88		11	0.923564
604	88		11		0.923564
605	88		11		0.923564
606	88	11			0.923564
607			88	11	0.923564
609			88	11	0.923564
611	11			88	0.923564
656	10			90	0.90298
657		10		90	0.90298
658			90	10	0.90298
659		10	90		0.90298
660	10		90		0.90298
792		10		90	0.90298
794	90			10	0.90298
795		10	90		0.90298
801		10		90	0.90298
808	90	10			0.90298
813		11		88	0.923564
874	62	37			1.0
875	62		37		1.0
876	50			50	1.0
877	50	50			1.0
879			50	50	1.0
885			50	50	1.0
886			50	50	1.0
890		50	50		1.0
891	50			50	1.0
892			50	50	1.0
894		50	50		1.0
897		50		50	1.0
899	50	50			1.0
906		26		73	1.0
908	73			26	1.0
916	73	26			1.0
919		73	26		1.0
920	73		26		1.0
921	73	26			1.0
922			73	26	1.0
923		73	26		1.0
926	26	73			1.0
927		26		73	1.0
931	23	76			1.0
932			11	88	0.999952
936			11	88	0.999952
938		11		88	0.999952
940	88			11	0.999952
944		11	88		0.999952
946	88		11		0.999952
947		88		11	0.999952
950	88			11	0.999952
951		11	88		0.999952
952	11		88		0.999952

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain