SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19207

Length: 407 nt

UniGene Fasta

>uagpf_v2_unigene19207
CGTCGTGACCTTGGCTGTCACTCATTCTTTGAGGAGATGACAGGGTACATCAAGCAAGGAAAAATCAAATACTCGGACCATGTTAACCTGGGGTTGGACAGTTTCTTGGAAGCTTTTAACTCCATGTTTACTGGAGAGAATATTGGTAAACCTGTCATTTATCTGGGGCCACCACCGCTACCAAAATAAATTCGGGATGAAGCCACCATAATGAATTCTGGATGAATATGAGAGGTAAATTCGGGATGAAGCCACCATAATGAATTCTGGATGAATATGAGAGGGCATATTTCTTGAAAGAAGATGGGAAGAGGATCTTATCTGCAATAATGTCATATGAGAGGGCATGTTTCTGGAAGTGGGGAATGGTAAGAGGTTCTGGGATAATGCAGACAATGTGACAGGCA

Ace file of the UniGene uagpf_v2_unigene19207

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene23752	11/15
SustainPine v2.0	sp_v2.0_unigene79401	2/15

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phenylpropenal double-bond reductase n=1 Tax=Pinus taeda RepID=Q0PIN2_PINTA	-	-	1.0e-19	89%
FL-Next	tr=Phenylpropenal double-bond reductase; Pinus taeda (Loblolly pine).	-	-	0.0	88%
Blast2go	phenylpropenal double-bond reductase	-	-	1.24787e-25	90%

Source	InterPros	Term	Type	Identity
Sma3	Alcohol dehydrogenase superfamily, zinc-type	IPR002085	-	-
Sma3	Alcohol dehydrogenase, C-terminal	IPR013149	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q0PIN2

Fln msg: your sequence is shorter than subject: 63 - 351

Fln protein: RRDLGCHSFFEEMTGYIKQGKIKYSDHVNLGLDSFLEAFNSMFTGENIGKPVIYLGPPPLPK*

Protein Length: 64

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTCTTTGAGGAGATGACAGGGTACATCAAGCAAGGAAAAATCAAATACTCGGACCATGTTAACCTGGGGTTGGACAGTTTCTTGGAAGCTTTTAACTCCATGTTTACTGGAGAGAATATTGGTAAACCTGTCATTTATCTGGGGCCACCACCGCTACCAAAATAA___ATTCGGGATGAAGCCACCATAATGAATTCTGGATGAATATGAGAGGTAAATTCGGGATGAAGCCACCATAATGAATTCTGGATGAATATGAGAGGGCATATTTCTTGAAAGAAGATGGGAAGAGGATCTTATCTGCAATAATGTCATATGAGAGGGCATGTTTCTGGAAGTGGGGAATGGTAAGAGGTTCTGGGATAATGCAGACAATGTGACAGGCA

Fln Alignment:

Contig19207___FFEEMTGYIKQGKIKYSDHVNLGLDSFLEAFNSMFTGENIGKPVIYLGPPPLPK
Q0PIN2________________FFEEMTGYIKQGKIKYKEDVKVGLDSFLEAFNSMFTGENIGKPVIYLG-PPLPK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain