SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19138

Length: 1144 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19138

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10647	55/60

Source	Descriptions	Term	Type	Identity
AutoFact	RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase emb\|CAA12028.1\| G	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	87%
Blast2go	lactoylglutathione lyase	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	Lactoylglutathione lyase.	EC:4.4.1.5	-	0.0	86%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Pyruvate metabolism	00620		0.0	86%

Source	GOs	Term	Type	Identity
Blast2go	response to cadmium ion	GO:0046686	Biological Process	86%
Blast2go	carbohydrate metabolic process	GO:0005975	Biological Process	86%
Blast2go	response to stress	GO:0006950	Biological Process	86%
Blast2go	calmodulin binding	GO:0005516	Molecular Function	86%
Blast2go	metal ion binding	GO:0046872	Molecular Function	86%
Blast2go	lactoylglutathione lyase activity	GO:0004462	Molecular Function	86%
Blast2go	chloroplast	GO:0009507	Cellular Component	86%

Source	InterPros	Term	Type	Identity
Sma3	Glyoxalase/fosfomycin resistance/dioxygenase	IPR004360	-	-
Sma3	Glyoxalase I	IPR004361	-	-
Sma3	Glyoxalase I, conserved site	IPR018146	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NZY0

Fln msg:

Fln protein: MAMAVSAARLLLIRHSRLLLFTCPPAAFAISSADASSNFGHAFLAPKFITSFNQKQQHRLKTFATMASQGKEISANNPGLSDKPDEATKGYFLQQTMLRVKDPKISLDSYSRVLGMKLLKRLDFPDMKFSLYFLGYEDTDAAPADPVERTVWTFQKVAIELTHNWGTESDPDFKGYHNGNSEPRGFGHFGITVDDTYKACERFAALGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRIGQISSSAA*

Protein Length: 251

Fln nts: CGTCGTGACCTTGGCTGTCACTCAA_-_ATGGCTATGGCTGTCTCCGCAGCTCGGCTCCTTCTAATCCGTCATTCTCGTCTCCTGCTTTTTACCTGCCCTCCCGCTGCTTTTGCTATTTCATCCGCCGATGCCAGTTCCAACTTCGGACATGCTTTCCTTGCCCCTAAATTCATTACATCTTTCAATCAAAAACAACAGCATAGATTGAAAACGTTTGCCACCATGGCCAGCCAAGGTAAAGAGATTTCTGCCAACAATCCAGGGCTTAGTGACAAGCCAGACGAAGCTACAAAAGGGTATTTTTTGCAGCAGACGATGCTCAGAGTCAAAGACCCGAAGATCAGCTTGGATTCCTATTCGCGAGTCTTGGGCATGAAATTGCTTAAAAGATTGGATTTTCCAGACATGAAGTTTAGTCTCTACTTTTTGGGGTATGAGGATACTGATGCCGCACCTGCAGATCCAGTGGAACGTACTGTCTGGACTTTTCAGAAAGTCGCTATTGAGCTTACACATAACTGGGGAACTGAATCTGATCCTGACTTTAAAGGCTATCATAATGGAAACAGTGAACCACGTGGTTTTGGACATTTTGGAATTACTGTAGATGATACGTACAAAGCCTGTGAAAGGTTTGCAGCACTTGGAGTTGAGTTTGTCAAAAAGCCAGATGATGGTAAGATGAAGGGTTTGGCTTTCATCAAGGATCCTGATGGTTATTGGATTGAAATCTTTGATTTAAAAAGAATTGGTCAAATAAGTTCTAGTGCAGCTTGA___AGTGCAATCACATTAAGAGCTCGTTTGGAATGTTATAATACACTGAGAAGGTCGAGTCTTTCTTGGGGAATTCTACTATTTATAGAGGTTTGACTTTAAGCATCATGGCTTCTGCAAATAGAGATAAGTGTCGGAGTTGAACGTAATTAGAGAACTTGTTATTGAAACTATGCAGTCAAATTCTGGGTGCTTTTTTTCCCATCTTTGACATTTTGTGTTGATTTGTGAGAGTGATCATTTATAATAAATATTTCAGTTGATCAAAGTTTCTTCTTCAGATACCTGATTTGCGAATGTGAATTTTTTATCATACAGAAACTCGAGTAATACTCACGGCCAGAGTTTGATGGCATCTCAATGTTGGACTGG

Fln Alignment:

Contig19138___MAMAVSAAXXXXXXXXXXXXF-TCPPXXXXXXXXXXXXNFGHAFLAPKFITSFNQKQQHRLKTFATMASQGKEISANNPGLSDKPDEATKGYFLQQTMLRVKDPKISLDSYSRVLGMKLLKRLDFPDMKFSLYFLGYEDTDAAPADPVERTVWTFQKVAIELTHNWGTESDPDFKGYHNGNSEPRGFGHFGITVDDTYKACERFAALGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRIGQI
A9NZY0________________MAVVISAARLLLPIRHSRLLLSTCPPAPFAVSAANTSSESGHAFLAPKFITSFDQKQHHRLRAFATMASQAKEIPANNPGLNDKPDEATKGYFLQQTMLRVKDPKISLDFYSRVLGMKLLKRLDFPDMKFSLYFMGYEDTDAAPADSAERTVWTFQKVVIELTHNWGTESDPDFKGYHNGNSEPRGFGHFGITVDDTYKACERFAKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRIGQI

SNPs (tot: 48)

Position	A %	C %	G %	T %	Probability
78		66	33		0.997452
79	33			66	0.997452
85		66	33		0.997452
86		33		66	0.997452
88			33	66	0.997452
90		33		66	0.997452
98	33	66			0.997452
406	85	14			0.993533
408	85			14	0.993533
410	85		14		0.993533
414	85	14			0.993533
415		14	85		0.993533
418		14		85	0.993533
419	85			14	0.993533
423	14			85	0.993533
507	90	10			0.90298
508			10	90	0.90298
512		10	90		0.90298
516	90		10		0.90298
517		90	10		0.90298
518	90	10			0.90298
519		90		10	0.90298
520	90		10		0.90298
522	90	10			0.90298
526		10	90		0.90298
527	10		90		0.90298
535	84	15			0.999986
536	84		15		0.999986
542		15		84	0.999986
544		84		15	0.999986
547	84		15		0.999986
562	89		10		0.999919
564	89	10			0.999919
565	89		10		0.999919
570	89	10			0.999919
572		89		10	0.999919
573	83	8	4	4	0.998844
577	79		12	8	1.0
581	86			13	1.0
582		91		8	0.999807
586	4	9	86		0.999642
588			9	90	0.999842
590		9		90	0.999842
591	9		90		0.999842
592		9	54	36	1.0
593	90			9	0.999842
816		6		93	0.999153
837	93	6			0.99903

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain