SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene19031

Length: 666 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene19031

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8184	12/18
SustainPine v2.0	sp_v2.0_unigene60316	4/18

Source	Descriptions	Term	Type	Identity
AutoFact	Cinnamyl alcohol dehydrogenase n=4 Tax=Rosaceae RepID=Q2Z1Z0_PRUMU	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	cinnamyl alcohol dehydrogenase	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	Alcohol dehydrogenase.	EC:1.1.1.1	-	0.0	86%

Source	KEGGs	Term	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010	86%
Blast2go	Fatty acid metabolism	00071	86%
Blast2go	Glycine, serine and threonine metabolism	00260	86%
Blast2go	Tyrosine metabolism	00350	86%
Blast2go	Chloroalkane and chloroalkene degradation	00625	86%
Blast2go	Naphthalene degradation	00626	86%
Blast2go	Retinol metabolism	00830	86%
Blast2go	Metabolism of xenobiotics by cytochrome P450	00980	86%
Blast2go	Drug metabolism - cytochrome P450	00982	86%
Blast2go	Metabolic pathways	01100	86%
Blast2go	Biosynthesis of secondary metabolites	01110	86%

Source	GOs	Term	Type	Identity
Blast2go	cellular metabolic process	GO:0044237	Biological Process	86%
Blast2go	coenzyme binding	GO:0050662	Molecular Function	86%
Blast2go	alcohol dehydrogenase (NAD) activity	GO:0004022	Molecular Function	86%
Blast2go	plasma membrane	GO:0005886	Cellular Component	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	NAD-dependent epimerase/dehydratase	IPR001509	-	0.0	-
Sma3	NAD(P)-binding domain	IPR016040	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 54)

Position	A %	C %	G %	T %	Probability
73		33	66		0.997452
76		33		66	0.997452
78	66			33	0.997452
82		33	66		0.997452
83	66	33			0.997452
87		66	33		0.997452
89		66		33	0.997452
90	66		33		0.997452
91		66		33	0.997452
92		33		66	0.997452
93	33			66	0.997452
109		25	75		0.996473
110	75		25		0.996473
113		75	25		0.996473
117		25	75		0.996473
120	75			25	0.996473
121	75		25		0.996473
122	75		25		0.996473
125	75		25		0.996473
129		25		75	0.996473
130		75		25	0.996473
138		75		25	0.996473
144			20	80	0.995493
148		80		20	0.995493
149	80		20		0.995493
152	80	20			0.995493
153	80			20	0.995493
154	80			20	0.995493
156			20	80	0.995493
157		20	80		0.995493
162		20	80		0.995493
163	80			20	0.995493
164		20		80	0.995493
165	20		80		0.995493
168	80			20	0.995493
176		16		83	0.994512
180		83	16		0.994512
181		83		16	0.994512
182			16	83	0.994512
187	83			16	0.994512
188			16	83	0.994512
189	83		16		0.994512
195	16			83	0.994512
197	83			16	0.994512
198	83	16			0.994512
304	90	10			0.90298
308	10		90		0.90298
317			14	85	0.993533
319	85		14		0.993533
321	85	14			0.993533
323		85		14	0.993533
327	85			14	0.993533
328	85		14		0.993533
493		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain