SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene18829

Length: 624 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene18829

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18007	11/11

Source	Descriptions	Term	Type	Identity
AutoFact	Uridine nucleosidase 1 [Arabidopsis thaliana] sp\|Q9SJM7.2\|URH1_ARATH RecName: Full=Uridine nucleosidase 1; AltName: Full=Uridine ribohydrolase 1 gb\|AAL06843.1\| At2g36310/F2H17.8 [Arabidopsis thaliana] gb\|AAL47407.1\| At2g36310/F2H17.8 [Arabidopsis thaliana	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	inosine-uridine preferring ribonucleoside hydrolase	-	-	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	Uridine nucleosidase.	EC:3.2.2.3	-	0.0	82%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Pyrimidine metabolism	00240		0.0	82%
Blast2go	Adenosine nucleosidase.	EC:3.2.2.7	-	0.0	82%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Purine metabolism	00230		0.0	82%
Blast2go	Inosine nucleosidase.	EC:3.2.2.2	-	0.0	82%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Purine metabolism	00230		0.0	82%

Source	GOs	Term	Type	Identity
Blast2go	uridine catabolic process	GO:0006218	Biological Process	82%
Blast2go	purine nucleoside catabolic process	GO:0006152	Biological Process	82%
Blast2go	uridine nucleosidase activity	GO:0045437	Molecular Function	82%
Blast2go	adenosine nucleosidase activity	GO:0047622	Molecular Function	82%
Blast2go	inosine nucleosidase activity	GO:0047724	Molecular Function	82%
Blast2go	cytosol	GO:0005829	Cellular Component	82%
Blast2go	xanthosine nucleotidase activity	GO:0072585	Biological Process	82%

Source	InterPros	Term	Type	e value	Identity
Sma3	Inosine/uridine-preferring nucleoside hydrolase domain	IPR001910	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 40)

Position	A %	C %	G %	T %	Probability
46		40	60		1.0
48	60			40	1.0
49	60	40			1.0
52	60		40		1.0
54		40		60	1.0
57			60	40	1.0
58			40	60	1.0
59	60		40		1.0
60	60	40			1.0
62			40	60	1.0
66		40	60		1.0
207	83			16	0.994512
210		16		83	0.994512
212	83			16	0.994512
213		83	16		0.994512
214			16	83	0.994512
216	83			16	0.994512
219	83	16			0.994512
223		16	83		0.994512
230	75		25		1.0
231			75	25	1.0
233			25	12	1.0
237	25			75	1.0
238		25		75	1.0
244	75		25		1.0
249		28	71		1.0
251		28	71		1.0
252			71	28	1.0
335		85		14	0.993533
337	14		85		0.993533
339		14		85	0.993533
341		85		14	0.993533
345	85	14			0.993533
346	85			14	0.993533
347	85		14		0.993533
349		14		85	0.993533
350	14		85		0.993533
365		71	28		1.0
406		14	85		0.993533
410	85	14			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain