SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene18786

Length: 941 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene18786

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene21948	30/40
SustainPine v2.0	sp_v2.0_unigene23243	9/40

Source	Descriptions	Term	Type	Identity
AutoFact	phosphatidic acid phosphatase alpha [Vigna unguiculata] gb\|ABN13873.1\| phosphatidic acid phosphatase alpha [Vigna unguiculata]	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	phosphatidic acid phosphatase	-	-	80%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphatidate phosphatase.	EC:3.1.3.4	-	0.0	80%

Source	KEGGs	Term	Identity
Blast2go	Glycerolipid metabolism	00561	80%
Blast2go	Glycerophospholipid metabolism	00564	80%
Blast2go	Ether lipid metabolism	00565	80%
Blast2go	Sphingolipid metabolism	00600	80%
Blast2go	Metabolic pathways	01100	80%

Source	GOs	Term	Type	Identity
Blast2go	abscisic acid mediated signaling pathway	GO:0009738	Biological Process	80%
Blast2go	phosphatidate phosphatase activity	GO:0008195	Molecular Function	80%
Blast2go	plasma membrane	GO:0005886	Cellular Component	80%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphatidic acid phosphatase/chloroperoxidase, N-terminal	IPR016118	-	0.0	-
Sma3	Phosphatidic acid phosphatase type 2/haloperoxidase	IPR000326	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 75)

Position	A %	C %	G %	T %	Probability
76		33	66		0.997452
77	66		33		0.997452
86	66			33	0.997452
88	66		33		0.997452
89			33	66	0.997452
90		33		66	0.997452
92			33	66	0.997452
93	66			33	0.997452
96	66	33			0.997452
98		33	66		0.997452
99	33		66		0.997452
110		25	75		0.996473
111	75		25		0.996473
113	75	25			0.996473
119	75	25			0.996473
120	75	25			0.996473
121	75			25	0.996473
123	75		25		0.996473
125	75	25			0.996473
126	75			25	0.996473
127	25		75		0.996473
132		25		75	0.996473
136	75			25	0.996473
156		25	75		0.996473
177		20	80		0.995493
179	80			20	0.995493
180	80		20		0.995493
181	20		80		0.995493
182		20	80		0.995493
183	80	20			0.995493
184			80	20	0.995493
188	80	20			0.995493
189			80	20	0.995493
192		80		20	0.995493
195	71	28			1.0
196	71		14	14	0.984337
197	71	14		14	0.984337
198	85	14			0.993533
200	85			14	0.993533
201			14	85	0.993533
203		14		85	0.993533
205		71		28	1.0
207	85		14		0.993533
208			14	85	0.993533
213	85			14	0.993533
214		14	85		0.993533
216		14	85		0.993533
219	14			85	0.993533
247	6	6	12	75	0.999931
249			87	12	0.999964
250	81	12			0.999943
255	5	10		85	0.999793
258		10	90		0.999898
259	5		85	10	0.999793
269	90	10			0.999898
306		90		10	0.999898
321	10		90		0.999898
379	11	88			0.999952
384		12		87	1.0
394	92		7		0.999664
418			11	88	1.0
447	91		8		0.999766
463			11	88	0.999937
466		11		88	0.999952
501		14	85		0.999981
504	85		14		0.999981
506			14	85	0.999981
507	14			85	0.999981
512			16	83	0.999991
513			16	83	0.999991
516		83	16		0.999991
518		16		83	0.999991
520			83	16	0.999991
521		16	83		0.999991
522	16		83		0.999991

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain