SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene18764

Length: 662 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene18764

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene23577	9/20
SustainPine v2.0	sp_v2.0_unigene31105	7/20

Source	Descriptions	Term	Type	Identity
AutoFact	Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE	-	-	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	66%
Blast2go	protein	-	-	61%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Beta-lactamase, class-A/D	IPR000871	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Mannose-binding lectin	IPR001229	-	-
Sma3	C-5 cytosine methyltransferase	IPR001525	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3	Domain of unknown function DUF221	IPR003864	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	Methyltransferase type 11	IPR013216	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3		IPR018115	-	-
Sma3	Asp/Glu racemase, active site	IPR018187	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Full-Lengther Next Prediction

SNPs (tot: 65)

Position	A %	C %	G %	T %	Probability
97	66		33		0.997452
98	66			33	0.997452
99		66		33	0.997452
101		66		33	0.997452
102			33	66	0.997452
104		33		66	0.997452
106	66			33	0.997452
107	66			33	0.997452
110			33	66	0.997452
117	33	66			0.997452
118	66	33			0.997452
119	66			33	0.997452
120		33	66		0.997452
180	66	33			0.997452
190		12		87	0.992554
194		12	75		0.975346
195		12	87		0.992554
196	87			12	0.992554
197		25	75		1.0
198	87	12			0.992554
200		12		87	0.992554
201	75	12	12		0.975346
202			12	87	0.992554
203		12		87	0.992554
204			87	12	0.992554
207		12	87		0.992554
209		12		87	0.992554
210		12	75	12	0.975346
213	12			87	0.992554
214		12	87		0.992554
215	87		12		0.992554
225			75	25	1.0
238	85			14	0.993533
254		14	85		0.993533
267		10		90	0.90298
270		10		90	0.90298
271	90		10		0.90298
272	90			10	0.90298
275		10		90	0.90298
278		90		10	0.90298
279			10	90	0.90298
280	10		90		0.90298
284	90		10		0.90298
295		88		11	0.923564
308	11			88	0.923564
325	18	9		72	0.999994
349	85	14			0.999981
353	85		14		0.999981
354	85			14	0.999981
356	14	14	71		0.999974
359	85			14	0.999981
360	85			14	0.999981
361	85		14		0.999981
364			85	14	0.999981
380	5	27		66	1.0
397	33			66	1.0
405		61		38	1.0
526		14		85	0.993533
563	33	66			1.0
576		66		33	1.0
579		16	83		0.994512
588		83	16		0.994512
596		16		83	0.994512
613	33			66	1.0
616		20		80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain