SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene18682

Length: 963 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene18682

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1623	33/34

Source	Descriptions	Term	Type	Identity
AutoFact	SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref\|NP_850809.1\| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref\|NP_974767.1\| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref\|NP_001078572.1\| SCP1-like small phosphatase 5 [Arabidopsis	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Blast2go	protein	-	-	74%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Acting on ester bonds, Phosphoric monoester hydrolases.	EC:3.1.3.-	-	0.0	74%

Source	KEGGs	Term	Identity
Blast2go	Fructose and mannose metabolism	00051	74%
Blast2go	Ascorbate and aldarate metabolism	00053	74%
Blast2go	Lipopolysaccharide biosynthesis	00540	74%
Blast2go	Ether lipid metabolism	00565	74%
Blast2go	Sphingolipid metabolism	00600	74%
Blast2go	Thiamine metabolism	00730	74%
Blast2go	Riboflavin metabolism	00740	74%
Blast2go	Nicotinate and nicotinamide metabolism	00760	74%
Blast2go	Metabolic pathways	01100	74%
Blast2go	Biosynthesis of secondary metabolites	01110	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	dephosphorylation	GO:0016311	Biological Process	0.0	74%
Blast2go	phosphatase activity	GO:0016791	Molecular Function	0.0	74%

Source	InterPros	Term	Type	e value	Identity
Sma3	NLI interacting factor	IPR004274	-	0.0	-
Sma3	Dullard phosphatase domain, eukaryotic	IPR011948	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
344			30	70	1.0
346		30	70		1.0
348	70			30	1.0
352	70	30			1.0
357		30		70	1.0
360		10	90		0.90298
361	10			90	0.90298
362		10	70		0.999998
363		20		80	0.999996
364	90	10			0.90298
365	10		70		0.999998
369	80			20	0.999996
372	20			80	0.999996
577	90	10			0.90298
578	90		10		0.90298
580	90	10			0.90298
581			10	90	0.90298
584		10	90		0.90298
589		10		90	0.90298
590			90	10	0.90298
593		10	90		0.90298
946			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain