SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene18403

Length: 746 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene18403

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18818	37/39

Source	Descriptions	Term	Type	Identity
AutoFact	ABI3-interacting protein 2 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF6_9CONI	-	-	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	hydroxyproline-rich glycoprotein family protein	-	-	62%

Source	InterPros	Term	Type	e value	Identity
Sma3	Frigida-like	IPR012474	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 55)

Position	A %	C %	G %	T %	Probability
62	75		25		0.996473
64	75	25			0.996473
72		75		25	0.996473
73		75	25		0.996473
78	75		25		0.996473
79	75			25	0.996473
82		25	75		0.996473
85	25		75		0.996473
112	83		16		0.994512
116	83		16		0.994512
118		16		83	0.994512
119	83	16			0.994512
122			16	83	0.994512
126	83			16	0.994512
129		16	83		0.994512
130			83	16	0.994512
131	83	16			0.994512
132	16		83		0.994512
169		25		75	1.0
174	25	75			1.0
175	75	25			1.0
176		25	75		1.0
186		25		75	1.0
187	75			25	1.0
190	87			12	0.992554
204	76	15		7	0.999983
206	7	76		15	0.999983
207	84	15			0.999986
208	84		15		0.999986
210			15	84	0.999986
213		15	84		0.999986
214	84			15	0.999986
221			84	15	0.999986
224		84		15	0.999986
227	84	15			0.999986
228			84	15	0.999986
314		12		87	0.999964
315			12	87	0.999964
317	87	12			0.999964
319			87	12	0.999964
321	12		87		0.999964
323	87	12			0.999964
325		87		12	0.999964
326			12	87	0.999964
330	87			12	0.999964
331		12	87		0.999964
333		12	87		0.999964
359	93		6		0.999453
360	89	3		6	0.998304
361	89	6		3	0.998304
362		93	6		0.999453
368		89	3	7	0.998606
373	92		7		0.999532
643	90		10		0.90298
692		12		87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain