SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene18373

Length: 1311 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene18373

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene25194	28/54
SustainPine v2.0	sp_v2.0_unigene26724	3/54
SustainPine v2.0	sp_v2.0_unigene31314	18/54
SustainPine v2.0	sp_v2.0_unigene34428	1/54
SustainPine v2.0	sp_v2.0_unigene77067	1/54
SustainPine v2.0	sp_v2.0_unigene78961	1/54

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1S0_PHYPA	-	-	5.99994e-41	81%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	90%
Blast2go	skp1 family protein	-	-	0.0	88%

Source	InterPros	Term	Type	e value	Identity
Sma3	BTB/POZ fold	IPR011333	-	0.0	-
Sma3	SKP1 component, POZ	IPR016073	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
227	86		13		0.999973
231		87		12	0.999964
232	87		12		0.999964
234		12	87		0.999964
235		12		87	0.999964
236			87	12	0.999964
237		87		12	0.999964
238	87		12		0.999964
245	11		82	5	0.999919
345			88	11	0.999937
347	92			8	0.999718
350		8		92	0.999718
355			8	92	0.999718
361	91			8	0.999766
458	84	15			1.0
461	4		16	80	1.0
466	82			17	1.0
467	82			17	1.0
468			17	82	1.0
469	81		18		1.0
472			20	80	1.0
474		21		78	1.0
476		15		84	1.0
478	5	15	78		1.0
479	16		83		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain