SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene17843

Length: 1069 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene17843

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2336	19/19

Source	Descriptions	Term	Type	Identity
AutoFact	Enolase n=2 Tax=Selaginella moellendorffii RepID=D8QV15_SELML	-	-	79%
FL-Next	sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	66%
Blast2go	enolase	-	-	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphopyruvate hydratase.	EC:4.2.1.11	-	0.0	83%

Source	KEGGs	Term	Type	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010		83%
Blast2go	Methane metabolism	00680		83%
Blast2go	Biosynthesis of phenylpropanoids	01061		83%
Blast2go	Biosynthesis of terpenoids and steroids	01062		83%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063		83%
Blast2go	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064		83%
Blast2go	Biosynthesis of alkaloids derived from histidine and purine	01065		83%
Blast2go	Biosynthesis of alkaloids derived from terpenoid and polyketide	01066		83%
Blast2go	Biosynthesis of plant hormones	01070		83%
Blast2go	Metabolic pathways	01100		83%
Blast2go	Biosynthesis of secondary metabolites	01110		83%
Blast2go	Ubiquitin thiolesterase.	EC:3.1.2.15	-	83%

Source	GOs	Term	Type	Identity
Blast2go	ubiquitin-dependent protein catabolic process	GO:0006511	Biological Process	83%
Blast2go	glycolysis	GO:0006096	Biological Process	83%
Blast2go	phosphopyruvate hydratase activity	GO:0004634	Molecular Function	83%
Blast2go	ubiquitin thiolesterase activity	GO:0004221	Molecular Function	83%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	83%
Blast2go	cell surface	GO:0009986	Cellular Component	83%
Blast2go	phosphopyruvate hydratase complex	GO:0000015	Cellular Component	83%
Blast2go	nucleus	GO:0005634	Cellular Component	83%

Source	InterPros	Term	Type	e value	Identity
Sma3	Enolase	IPR000941	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LKJ8

Fln msg: Distance to subject end: 138 aas, your sequence is shorter than subject: 279 - 380

Fln protein: MQVQEYLEKHKLSRKIEEAVNAAVRAKAPDPVLYIANHMMRVVPSTITKLKARQIIDSRGNPTVEVDLCTNKGMFRASVPSGASTGIYEAVELRDGDESKYLGKGVLKAVTNINEKISAILVDMDPTKQMEIDKAMIELDNTKNKGELGANAILAVSMAVCKAGAAAKDIPLYQHIADLSGNPNFVLPVPAFNIINGGKHAGNKLAFQEFMILPIGASSFGEAMQMGCETYHHLKAVIKEKYGIDACNVGDEGGFAPSISSSKEGLDLIREAIERAGHT

Protein Length: 280

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACTTTGGAAAAAGCAAAAGCAATGCTCTTGGTTCTGCATAAATTTTTAACCGTGTAAGAACTAAATGCAAGGCCAACTTTTTCTCTGGAAGCCATATACAATTTGTGCAGCGCTGCTGCTTCTTCTTTGATCGATTATCGATTCATTTACCACATTCATCTTTACATTTGCATACATTTTCCTTGGACCGAATTCTAGCAATCACAAG_-_ATGCAGGTCCAGGAGTATTTGGAGAAGCACAAATTATCTCGCAAGATCGAGGAAGCTGTCAATGCTGCTGTCAGGGCAAAGGCCCCTGATCCAGTCCTCTACATTGCTAACCACATGATGAGAGTTGTTCCTTCCACAATAACAAAGTTAAAGGCACGACAAATTATTGATAGCAGAGGTAATCCTACAGTTGAAGTTGACCTGTGTACTAACAAAGGCATGTTTCGTGCATCTGTACCAAGTGGTGCCTCAACTGGAATATATGAGGCTGTGGAGTTACGTGATGGAGATGAAAGCAAGTACCTAGGAAAGGGTGTCTTAAAAGCTGTGACAAATATTAATGAGAAAATCTCTGCTATATTGGTTGATATGGATCCAACCAAACAAATGGAGATCGACAAAGCCATGATAGAATTGGATAATACAAAAAATAAGGGGGAGCTTGGAGCAAATGCAATTTTAGCTGTATCCATGGCAGTTTGTAAAGCTGGAGCTGCAGCAAAAGATATTCCACTGTACCAGCATATTGCTGATCTTTCAGGAAATCCAAATTTTGTTCTTCCTGTCCCAGCCTTCAACATAATAAATGGTGGAAAACATGCTGGAAATAAATTGGCTTTTCAGGAGTTCATGATTCTACCTATTGGAGCAAGCAGTTTTGGAGAAGCAATGCAAATGGGCTGTGAAACATACCACCACTTAAAGGCAGTAATAAAAGAAAAATATGGAATCGATGCTTGTAATGTTGGCGACGAAGGTGGCTTTGCTCCAAGCATCTCAAGTAGCAAAGAAGGCTTGGATCTCATCAGGGAAGCAATTGAGAGAGCTGGTCACACA

Fln Alignment:

Contig17843___STITKLKARQIIDSRGNPTVEVDLCTNKG-MFRASVPSGASTGIYEAVELRDGDESKYLGKGVLKAVTNINEKISAILVDMDPTKQMEIDKAMI-ELDNTKN-----KGELGANAILAVSMAVCKAGAAAKDIPLYQHIADLSGNPNFVLPVPAFNIINGGKHAGNKLAFQEFMILPIGASSFGEAMQMGCETYHHLKAVIKEKYGIDACNVGDEGGFAPSISSSKEGLDLIREAIERAGHT
B8LKJ8________________ATIKAVKARSIFDSRGNPTVEVDIHLSDGYLSRAAVPSGASTGVYEALELRDGGKD-YMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVIPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYT

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
153		37	62		1.0
154	62		37		1.0
160			37	62	1.0
162		37		62	1.0
164			62	37	1.0
165	62			37	1.0
166			37	62	1.0
167			37	62	1.0
169	55	11		33	1.0
170			44	55	1.0
172		44		55	1.0
174		88	11		0.923564
176		88	11		0.923564
180	88	11			0.923564
184	88		11		0.923564
185			11	88	0.923564
188			11	88	0.923564
194		11		88	0.923564
196		11	88		0.923564
197	11	88			0.923564
377		90		10	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain