SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene17473

Length: 773 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene17473

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene22335	8/51
SustainPine v2.0	sp_v2.0_unigene26007	9/51
SustainPine v2.0	sp_v2.0_unigene28436	32/51
SustainPine v2.0	sp_v2.0_unigene80563	1/51

Source	Descriptions	Term	Type	Identity
AutoFact	SURNod19 domain containing protein	-	-	58%
FL-Next	tr=JHL07K02.3 protein; Jatropha curcas.	-	-	62%
Blast2go	19-like protein	-	-	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuole	GO:0005773	Cellular Component	0.0	71%

Source	InterPros	Term	Type	e value	Identity
Sma3	Stress up-regulated Nod 19	IPR011692	-	0.0	-
Sma3	Phospholipase A2, active site	IPR013090	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 62)

Position	A %	C %	G %	T %	Probability
79		50	50		1.0
82		50		50	1.0
83	50		50		1.0
86	50			50	1.0
88		50	50		1.0
94	50	50			1.0
95		20		80	0.995493
98	40	60			1.0
99	40		60		1.0
101	40			60	1.0
102		80	20		0.995493
104		20		80	0.995493
105		20	80		0.995493
108	80		20		0.995493
109			20	80	0.995493
111		80	20		0.995493
113		20	80		0.995493
115		20	80		0.995493
116		80		20	0.995493
118	20			80	0.995493
172		80		20	0.995493
175	83	16			0.994512
176	83		16		0.994512
181			83	16	0.994512
182		83	16		0.994512
185	83	16			0.994512
186		83		16	0.994512
187	83			16	0.994512
194		16		83	0.994512
196		16		83	0.994512
197			83	16	0.994512
198	71	28			1.0
199	85		14		0.993533
201		85		14	0.993533
204	14			85	0.993533
205		14		85	0.993533
208	85			14	0.993533
209			14	85	0.993533
210		85	14		0.993533
211		14		85	0.993533
213		85	14		0.993533
218	85	14			0.993533
219			85	14	0.993533
227		12		87	0.992554
232	87		12		0.992554
233		72		27	1.0
237		27	72		1.0
240		5	27	50	1.0
241			22	16	1.0
344	50		50		1.0
464		64		36	1.0
465		40		36	1.0
486			80	19	1.0
506		80	19		1.0
514	19		80		1.0
526	80		19		1.0
586	78			21	1.0
650		35		64	1.0
654	61			38	1.0
667	66		33		1.0
670			62	37	1.0
672	62		37		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain