SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene17449

Length: 824 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene17449

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene13716	17/19

Source	Descriptions	Term	Type	Identity
AutoFact	vesicle transport v-SNARE 11-like [Solanum tuberosum]	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	84%
Blast2go	vesicle transport v-snare 13	-	-	89%

Source	GOs	Term	Type	Identity
Blast2go	vesicle-mediated transport	GO:0016192	Biological Process	89%
Blast2go	intracellular protein transport	GO:0006886	Biological Process	89%
Blast2go	membrane	GO:0016020	Cellular Component	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	Vesicle transport v-SNARE, N-terminal	IPR007705	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 70)

Position	A %	C %	G %	T %	Probability
41		50		50	1.0
42			50	50	1.0
46		50		50	1.0
47	50		50		1.0
49		50		50	1.0
50		50		50	1.0
53		50	50		1.0
54	50		50		1.0
55	50	50			1.0
59		50	50		1.0
62		50		50	1.0
65	50			50	1.0
69		20		80	0.995493
70			20	80	0.995493
76	80	20			0.995493
78			80	20	0.995493
79	80			20	0.995493
80	80		20		0.995493
81	80		20		0.995493
82	80	20			0.995493
84	80		20		0.995493
90		20		80	0.995493
92		20	80		0.995493
93	20		80		0.995493
203	85	14			0.993533
205		85		14	0.993533
206	85	14			0.993533
208	85			14	0.993533
209	85		14		0.993533
212		14		85	0.993533
216	85		14		0.993533
218	85	14			0.993533
219			85	14	0.993533
225	85	14			0.993533
226	85			14	0.993533
268		87	12		0.992554
270		12		87	0.992554
272	87		12		0.992554
274		12	87		0.992554
276	87			12	0.992554
277	87			12	0.992554
284			12	87	0.992554
285			87	12	0.992554
288			87	12	0.992554
290	12	87			0.992554
413	87	12			0.992554
417	87		12		0.992554
418			87	12	0.992554
421	87	12			0.992554
423			87	12	0.992554
424	87		12		0.992554
428	87			12	0.992554
429		87	12		0.992554
430	87			12	0.992554
435	88	11			0.923564
436	88		11		0.923564
439	11		88		0.923564
441		11		88	0.923564
443		88		11	0.923564
445	88		11		0.923564
447	87			12	0.992554
453	85	14			0.993533
454	85			14	0.993533
455		14	85		0.993533
463		10		90	0.90298
468		10	90		0.90298
471		10	90		0.90298
699			12	87	0.992554
708		87		12	0.992554
718	12		87		0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain