SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene17341

Length: 1006 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene17341

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7096	41/45
SustainPine v2.0	sp_v2.0_unigene82061	2/45

Source	Descriptions	Term	Type	Identity
AutoFact	Aha1 domain-containing protein [Arabidopsis thaliana] gb\|AAG51059.1\|AC069473_21 unknown protein; 42843-40829 [Arabidopsis thaliana] dbj\|BAB03117.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAM65332.1\| unknown [Arabidopsis thaliana] gb\|AEE75141.1\|	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	78%
Blast2go	protein	-	-	76%

Source	GOs	Term	Type	Identity
Blast2go	response to stress	GO:0006950	Biological Process	76%
Blast2go	positive regulation of ATPase activity	GO:0032781	Biological Process	76%
Blast2go	ATPase activator activity	GO:0001671	Molecular Function	76%
Blast2go	chaperone binding	GO:0051087	Molecular Function	76%
Blast2go	cytoplasm	GO:0005737	Cellular Component	76%

Source	InterPros	Term	Type	Identity
Sma3	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	-
Sma3	Activator of Hsp90 ATPase homologue 1-like	IPR013538	-	-
Sma3	Activator of Hsp90 ATPase, N-terminal	IPR015310	-	-

Full-Lengther Next Prediction

SNPs (tot: 28)

Position	A %	C %	G %	T %	Probability
83	10			90	0.90298
84			10	90	0.90298
87	10	90			0.90298
88			10	90	0.90298
91		90	10		0.90298
92	90		10		0.90298
93		90	10		0.90298
94		10		90	0.90298
95		90	10		0.90298
96	90		10		0.90298
163		11		88	0.999952
174			88	11	0.999952
178	92	8			0.999718
231	90	9			1.0
364	90			9	0.999842
646	87	12			0.992554
647			12	87	0.992554
649		12	87		0.992554
650	87		12		0.992554
653	12		87		0.992554
662	12			87	0.992554
663		12		87	0.992554
664	87			12	0.992554
665		12		87	0.992554
666	12		87		0.992554
676			85	14	0.993533
734			83	16	0.994512
921	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain