SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene17190

Length: 1012 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene17190

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6504	31/31

Source	Descriptions	Term	Type	Identity
AutoFact	putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp\|Q9M8Y0.1\|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb\|A	-	-	78%
FL-Next	sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress).	-	-	80%
Blast2go	o-linked c transferase like protein	-	-	88%

Source	ECs	Term	Type	e value	Identity
Blast2go	Protein N-acetylglucosaminyltransferase.	EC:2.4.1.94	-	0.0	88%

Source	GOs	Term	Type	Identity
Blast2go	protein O-linked glycosylation	GO:0006493	Biological Process	88%
Blast2go	protein N-acetylglucosaminyltransferase activity	GO:0016262	Molecular Function	88%
Blast2go	binding	GO:0005488	Molecular Function	88%

Source	InterPros	Term	Type	Identity
Sma3	Tetratricopeptide TPR-1	IPR001440	-	-
Sma3	Sel1-like	IPR006597	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	Tetratricopeptide repeat-containing domain	IPR013026	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Tetratricopeptide repeat	IPR019734	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9M8Y0

Fln msg: Distance to subject end: 102 aas, your sequence is shorter than subject: 337 - 977

Fln protein: RRDLGCHSFEPVLTLEISRKYAEHCLLVASRFGPQSFVHPPRLPVKGEGGSGRLRVGYVSSDFGNHPLSHLMGSVFGMHNQEHIEVFCYALSQSDGSEWRQRIQSEVEHFIDVSALSSDMIARMISEAHIQILINLNGYTKGARNEIFAMKPAPIQVSYMGFPGTTGANYIDYLVTDEFVSPTHLSHIYSEKLVHMPHCYFVNDYKQKNQDVLDPACHPKRLDYGLPEDKFLFACFNQLYKIHPDIFITWCNILKRAPNSALWLLRFPAAGESRLQAFAAAQGVRPDQIIFTDVAAKSEHIRRSSLADVCLDTPLCNAHTTGTDVLWAGVPIITLPL

Protein Length: 338

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTGAACCAGTGTTGACTTTAGAAATCAGTCGGAAATATGCAGAGCATTGTCTTCTTGTTGCATCTCGTTTTGGACCTCAGTCTTTTGTACACCCTCCTCGTTTGCCTGTGAAAGGTGAGGGTGGCAGCGGCAGGCTTAGGGTGGGGTATGTCAGCAGTGATTTTGGTAACCACCCACTTTCACACCTCATGGGCTCTGTTTTTGGTATGCATAATCAAGAGCACATTGAGGTATTTTGCTATGCATTGAGTCAGAGTGATGGCAGTGAGTGGAGACAGCGTATACAATCAGAGGTAGAACACTTCATTGATGTTTCTGCCCTTTCATCTGATATGATTGCACGGATGATATCTGAAGCTCATATTCAAATTCTTATCAACTTGAATGGGTATACAAAGGGTGCTCGGAATGAAATTTTTGCAATGAAACCAGCCCCCATTCAAGTTTCATATATGGGCTTTCCTGGAACCACTGGTGCCAATTATATTGACTATTTAGTGACAGACGAGTTTGTTTCACCTACACATTTATCACATATCTATTCTGAGAAGCTTGTACATATGCCACATTGTTATTTTGTGAATGATTACAAGCAGAAAAATCAAGATGTTTTAGATCCTGCGTGCCATCCAAAACGTTTAGATTATGGACTACCGGAAGACAAATTTTTGTTTGCCTGCTTTAATCAGCTTTACAAAATACATCCCGATATATTCATAACATGGTGCAATATTCTGAAACGTGCACCAAATAGTGCTCTGTGGCTTCTGAGATTTCCTGCTGCAGGAGAAAGTAGATTGCAAGCCTTTGCTGCTGCACAGGGTGTCAGACCTGACCAGATTATATTCACAGATGTTGCAGCCAAGAGTGAGCATATACGCCGTAGCTCATTGGCTGATGTGTGCCTTGATACGCCATTATGTAATGCACATACCACTGGCACCGATGTGCTCTGGGCTGGTGTTCCTATTATAACTCTTCCACTTG

Fln Alignment:

Contig17190___HSFEPVLTLEISRKYAEHCLLVASRFGPQSFVHPPRLPVKGEGGSGRLRVGYVSSDFGNHPLSHLMGSVFGMHNQEHIEVFCYALSQSDGSEWRQRIQSEVEHFIDVSALSSDMIARMISEAHIQILINLNGYTKGARNEIFAMKPAPIQVSYMGFPGTTGANYIDYLVTDEFVSPTHLSHIYSEKLVHMPHCYFVNDYKQKNQDVLDPACHPKRLDYGLPEDKFLFACFNQLYKIHPDIFITWCNILKRAPNSALWLLRFPAAGESRLQAFAAAQGVRPDQIIFTDVAAKSEHIRRSSLADVCLDTPLCNAHTTGTDVLWAGVPIITLPL
Q9M8Y0________________YPIDPILALEISRKYAAHCSIIASRFGLPPFTHPAGLPVKREGGFKRLRIGYVSSDFGNHPLSHLMGSVFGMHNRENVEVFCYALSANDNTEWRQRIQSEAEHFLDVSAMSSDAIAKIINQDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSPLQYAHIYSEKLVHLPHCYFVNDYKQKNQDVLDPNSKPKRSDYGLPEDKFIFACFNQLYKMDPEIVNTWCNILKRVPNSALWLLRFPAAGEMRFRTYAAAQGVQPDQIIFTDVAMKSEHIRRSVLADVILDTPLCNGHTTGTDVLWAGVPMITLPL

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
388		11		88	0.923564
390		11		88	0.923564
439	87	12			0.992554
442		14		85	0.993533
443			14	85	0.993533
445			14	85	0.993533
446	14		85		0.993533
448	85	14			0.993533
449	85			14	0.993533
452	85	14			0.993533
453	85			14	0.993533
454	85		14		0.993533
455		85		14	0.993533
461		85		14	0.993533
463	14	85			0.993533
813	80			20	0.995493
814		20	80		0.995493
816	80			20	0.995493
819	80	20			0.995493
820	80	20			0.995493
821			80	20	0.995493
823	80		20		0.995493
825	80	20			0.995493
827			20	80	0.995493
828			80	20	0.995493
831	80	20			0.995493
832			80	20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain