SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene17062

Length: 1022 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene17062

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene13038	28/29

Source	Descriptions	Term	Type	Identity
AutoFact	GTP cyclohydrolase I [Solanum lycopersicum]	-	-	44%
FL-Next	tr=Putative uncharacterized protein; Zea mays (Maize).	-	-	60%
Blast2go	gtp cyclohydrolase 1 isoform	-	-	59%

Source	InterPros	Term	Type	e value	Identity
Sma3	GTP cyclohydrolase I	IPR001474	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 26)

Position	A %	C %	G %	T %	Probability
243			25	75	0.996473
245		25		75	0.996473
246	75		25		0.996473
247	75			25	0.996473
251	75	25			0.996473
252	75	25			0.996473
256			25	75	0.996473
257		25	75		0.996473
258	75			25	0.996473
264			75	25	0.996473
265	75	25			0.996473
266	25		75		0.996473
505	90		10		0.90298
510		11		88	0.923564
511		11		88	0.923564
637			87	12	0.992554
748		16	83		0.994512
750	83			16	0.994512
753		14	85		0.993533
754		14	85		0.993533
755			85	14	0.993533
756		85		14	0.993533
757			14	85	0.993533
760		85		14	0.993533
765	85			14	0.993533
766	85	14			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain